RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 NDUFA8P51970 172 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MYL6P60660 151 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 ENPEPQ07075 957 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 DPYDQ12882 1025 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 CCINQ13939 588 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 BECN1Q14457 450 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 DGKKQ5KSL6 1271 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 TDRD10Q5VZ19 366 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 TXNDC8Q6A555 127 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SPEM1Q8N4L4 309 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 CSGALNACT1Q8TDX6 532 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 NOC3LQ8WTT2 800 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MRPS31Q92665 395 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MYLPFQ96A32 169 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SYAP1Q96A49 352 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 ZFYVE19Q96K21 471 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 C8orf48Q96LL4 319 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 GCNAQ96QF7 691 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SLC22A12Q96S37 553 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SCAND2PQ9GZW5 306 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 GTSE1Q9NYZ3 720 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 IL37Q9NZH6 218 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 R3HCC1Q9Y3T6 440 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 PATJQ8NI35 1801 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 TICRRQ7Z2Z1 1910 aa10.39□□□□□ -0.75
TMEM39A-207ENST00000482162 MYO15AQ9UKN7 3530 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 CEP250Q9BV73 2442 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 DPYSL4O14531 572 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 VNN1O95497 513 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 OLFM2O95897 454 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 NR3C1P04150 777 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 PTPN1P18031 435 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 BDNFP23560 247 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 SYKP43405 635 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 SOX9P48436 509 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 CASP4P49662 377 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 PSMC1P62191 440 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 CSTF1Q05048 431 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 FAM160A1Q05DH4 1040 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 TNK2Q07912 1038 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 KCNB1Q14721 858 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 TAF12Q16514 161 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 ITPRIPL2Q3MIP1 535 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 ZACNQ401N2 412 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 STKLD1Q8NE28 680 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 EPC1Q9H2F5 836 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 EXOC1Q9NV70 894 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 ATP6V1DQ9Y5K8 247 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 GREB1Q4ZG55 1949 aa10.38□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF840PA6NDX5 716 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 K7ESF4 209 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 OBSL1O75147 1896 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 AVPR1AP37288 418 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CXCL12P48061 93 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 PPP3CCP48454 512 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CCR3P51677 355 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 KPNA1P52294 538 aaPredicted RBP10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CACNA2D1P54289 1103 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 USP46P62068 366 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 DLG4P78352 724 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 RUNX3Q13761 415 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 NCOA4Q13772 614 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 ZNF77Q15935 545 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 SGSM1Q2NKQ1 1148 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 ZCWPW2Q504Y3 356 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 TMEM196Q5HYL7 178 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 TSSK4Q6SA08 328 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 KRBA2Q6ZNG9 492 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 PAQR9Q6ZVX9 377 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 SV2AQ7L0J3 742 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CRYBG2Q8N1P7 616 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 GUF1Q8N442 669 aaKnown RBP10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 B3GALNT2Q8NCR0 500 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 RUBCNQ92622 972 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 TAF4BQ92750 862 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 CYP2S1Q96SQ9 504 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 MMS19Q96T76 1030 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 B3GNT5Q9BYG0 378 aa10.37□□□□□ -0.75
TMEM39A-207ENST00000482162 SDCBP2Q9H190 292 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms