RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SLC2A14Q8TDB8 520 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 SECISBP2LQ93073 1101 aaKnown RBP10.74□□□□□ -0.69
USP39-215ENST00000481409 C18orf8Q96DM3 657 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 PCED1BQ96HM7 432 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 MED10Q9BTT4 135 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 C11orf84Q9BUA3 381 aaPredicted RBP10.74□□□□□ -0.69
USP39-215ENST00000481409 TRIM62Q9BVG3 475 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 SLC4A5Q9BY07 1137 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 UBE2OQ9C0C9 1292 aaKnown RBP10.74□□□□□ -0.69
USP39-215ENST00000481409 CRTAC1Q9NQ79 661 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 MRPL17Q9NRX2 175 aaKnown RBP10.74□□□□□ -0.69
USP39-215ENST00000481409 COMMD8Q9NX08 183 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 SSUH2Q9Y2M2 353 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 PCDHB5Q9Y5E4 795 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 TIMM13Q9Y5L4 95 aaPredicted RBP10.74□□□□□ -0.69
USP39-215ENST00000481409 IRAK3Q9Y616 596 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 VWA8A3KMH1 1905 aa10.74□□□□□ -0.69
USP39-215ENST00000481409 MYBPHLA2RUH7 354 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 NT5C1B-RDH14C9J2C7 533 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 F8W810 466 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 I3L4J1 428 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FGF18O76093 207 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FBXO21O94952 628 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 CTSAP10619 480 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 DESP17661 470 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 IGFBP6P24592 240 aaPredicted RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 ACAT1P24752 427 aaKnown RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 PSMC1P62191 440 aaKnown RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 PTP4A2Q12974 167 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 SHHQ15465 462 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 PSMD5Q16401 504 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 KIAA0319Q5VV43 1072 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 PLEKHA7Q6IQ23 1121 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 NYAP1Q6ZVC0 841 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FAM35AQ86V20 835 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 TTC30AQ86WT1 665 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 TMEM173Q86WV6 379 aaPredicted RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 PALB2Q86YC2 1186 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 WDTC1Q8N5D0 677 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 C3orf20Q8ND61 904 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 OR10T2Q8NGX3 314 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FNIP1Q8TF40 1166 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 CPA5Q8WXQ8 436 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 MYLPFQ96A32 169 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 ZNF653Q96CK0 615 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 NCAPGQ9BPX3 1015 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 B3GNT5Q9BYG0 378 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 LACRTQ9GZZ8 138 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 THAP2Q9H0W7 228 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 RXFP1Q9HBX9 757 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 NGRNQ9NPE2 291 aaKnown RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 DMAP1Q9NPF5 467 aaPredicted RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 LZTFL1Q9NQ48 299 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 FAM49BQ9NUQ9 324 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 ASNSD1Q9NWL6 643 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 TRMT1Q9NXH9 659 aaKnown RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 TAS2R14Q9NYV8 317 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 EHD2Q9NZN4 543 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 CNOT8Q9UFF9 292 aaKnown RBP10.73□□□□□ -0.69
USP39-215ENST00000481409 GUCA1BQ9UMX6 200 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 PCDHGC5Q9Y5F6 944 aa10.73□□□□□ -0.69
USP39-215ENST00000481409 NLRC5Q86WI3 1866 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 LINC01553A4QN01 128 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 SIGLEC16A6NMB1 481 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 TMCO5BA8MYB1 307 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ATP2C2O75185 946 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 AP1G2O75843 785 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 GLI1P08151 1106 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 CCDC130P13994 396 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ADORA2BP29275 332 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 TUFMP49411 452 aaKnown RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 VASPP50552 380 aaPredicted RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 ETF1P62495 437 aaKnown RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 RPL10AP62906 217 aaKnown RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 PDE4CQ08493 712 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ORC1Q13415 861 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 RAB33AQ14088 237 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ACAP1Q15027 740 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 PTPN20Q4JDL3 420 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 RTP2Q5QGT7 225 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 CLEC20AQ6ZU45 233 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 PAQR9Q6ZVX9 377 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 TMCO2Q7Z6W1 182 aaPredicted RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 VPS52Q8N1B4 723 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ZNF461Q8TAF7 563 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 SLC35G2Q8TBE7 412 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 RIN2Q8WYP3 895 aaPredicted RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 IRGQQ8WZA9 623 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 MCRS1Q96EZ8 462 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 C8orf48Q96LL4 319 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 TGS1Q96RS0 853 aaKnown RBP10.72□□□□□ -0.69
USP39-215ENST00000481409 LMAN2LQ9H0V9 348 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 ZBP1Q9H171 429 aa10.72□□□□□ -0.69
USP39-215ENST00000481409 LRRC4Q9HBW1 653 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms