RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 GRASPQ7Z6J2 395 aaPredicted RBP20.95■□□□□ 0.94
LIME1-205ENST00000480139 RBBP8NLQ8NC74 664 aaPredicted RBP20.95■□□□□ 0.94
LIME1-205ENST00000480139 MED10Q9BTT4 135 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 PHF7Q9BWX1 381 aaPredicted RBP20.95■□□□□ 0.94
LIME1-205ENST00000480139 CSNK1G1Q9HCP0 422 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 FAM49BQ9NUQ9 324 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 PRKAG3Q9UGI9 489 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 GREB1Q4ZG55 1949 aa20.95■□□□□ 0.94
LIME1-205ENST00000480139 VDRP11473 427 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 ANXA13P27216 316 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 GRIK1P39086 918 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 FANCCQ00597 558 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 DDR2Q16832 855 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 PABPC1LQ4VXU2 614 aaKnown RBP20.94■□□□□ 0.94
LIME1-205ENST00000480139 SGO2Q562F6 1265 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 DNAJB7Q7Z6W7 309 aaPredicted RBP20.94■□□□□ 0.94
LIME1-205ENST00000480139 ANP32EQ9BTT0 268 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 LRRC3Q9BY71 257 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 GANQ9H2C0 597 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 DMAP1Q9NPF5 467 aaPredicted RBP20.94■□□□□ 0.94
LIME1-205ENST00000480139 KRT82Q9NSB4 513 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 HCFC1R1Q9NWW0 138 aa20.94■□□□□ 0.94
LIME1-205ENST00000480139 AJAP1Q9UKB5 411 aaPredicted RBP20.94■□□□□ 0.94
LIME1-205ENST00000480139 A0A1W2PQC6 194 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 RNF225M0QZC1 329 aaPredicted RBP20.93■□□□□ 0.94
LIME1-205ENST00000480139 NOL4O94818 638 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 MICAL2O94851 1124 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 FGF19O95750 216 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 RHOP08100 348 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 FAM200BP0CF97 657 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 CSH1P0DML2 217 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 CSH2P0DML3 217 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 CACNA2D1P54289 1103 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 NR1I3Q14994 352 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 STILQ15468 1287 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 ARHGAP44Q17R89 818 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 TJAP1Q5JTD0 557 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 PPP1R26Q5T8A7 1209 aaPredicted RBP20.93■□□□□ 0.94
LIME1-205ENST00000480139 TMC8Q8IU68 726 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 SCN4BQ8IWT1 228 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 TRMT2BQ96GJ1 504 aaKnown RBP20.93■□□□□ 0.94
LIME1-205ENST00000480139 NAP1L5Q96NT1 182 aaPredicted RBP20.93■□□□□ 0.94
LIME1-205ENST00000480139 CORO1BQ9BR76 489 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 ASAH2Q9NR71 780 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 TMEM30AQ9NV96 361 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 USTQ9Y2C2 406 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 FHOD1Q9Y613 1164 aa20.93■□□□□ 0.94
LIME1-205ENST00000480139 MYH10P35580 1976 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 DOCK6Q96HP0 2047 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 F8VP50 259 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 TEX33O43247 280 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 AP1G2O75843 785 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 KRT5P13647 590 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 ADORA2BP29275 332 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 GPR15P49685 360 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 KLK7P49862 253 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 MYRFLQ96LU7 910 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 STK33Q9BYT3 514 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 GPR88Q9GZN0 384 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 PNPLA8Q9NP80 782 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 FAM207AQ9NSI2 230 aaPredicted RBP20.92■□□□□ 0.94
LIME1-205ENST00000480139 EHD2Q9NZN4 543 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 UNC80Q8N2C7 3258 aa20.92■□□□□ 0.94
LIME1-205ENST00000480139 SLC38A8A6NNN8 435 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 O00370 1275 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 ZNF197O14709 1029 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 CD19P15391 556 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 HMGA1P17096 107 aaKnown RBP20.91■□□□□ 0.94
LIME1-205ENST00000480139 NPR3P17342 541 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 FSHRP23945 695 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 MEA1Q16626 185 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 PRSS36Q5K4E3 855 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 CYP4A22Q5TCH4 519 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 CLEC20AQ6ZU45 233 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 PDZD4Q76G19 769 aaPredicted RBP20.91■□□□□ 0.94
LIME1-205ENST00000480139 ADHFE1Q8IWW8 467 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 FAM71AQ8IYT1 594 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 ANKRD52Q8NB46 1076 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 NEK11Q8NG66 645 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 GIPC2Q8TF65 315 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 PCMTD1Q96MG8 357 aaPredicted RBP20.91■□□□□ 0.94
LIME1-205ENST00000480139 SMOQ99835 787 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 DUSP16Q9BY84 665 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.91■□□□□ 0.94
LIME1-205ENST00000480139 UXTQ9UBK9 157 aaPredicted RBP20.91■□□□□ 0.94
LIME1-205ENST00000480139 NR2E1Q9Y466 385 aa20.91■□□□□ 0.94
LIME1-205ENST00000480139 FOXN3O00409 490 aaPredicted RBP20.9■□□□□ 0.94
LIME1-205ENST00000480139 UBASH3AP57075 661 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 NTHL1P78549 312 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 RAPGEF1Q13905 1077 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 DRAP1Q14919 205 aaPredicted RBP20.9■□□□□ 0.94
LIME1-205ENST00000480139 CNGA2Q16280 664 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 TAF12Q16514 161 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 SDHAF4Q5VUM1 108 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 LCLAT1Q6UWP7 414 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 DENND5BQ6ZUT9 1274 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 RNF214Q8ND24 703 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 ZMIZ2Q8NF64 920 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 GPR152Q8TDT2 470 aa20.9■□□□□ 0.94
LIME1-205ENST00000480139 TFAP2BQ92481 460 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms