RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 H7C4K7 107 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 I3L4J1 428 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ARNTLO00327 626 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 SPTLC1O15269 473 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TRIM49P0CI25 452 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TRIM49CP0CI26 452 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TGM1P22735 817 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ASPAP45381 313 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ID4P47928 161 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 GCLMP48507 274 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 MLLT6P55198 1093 aaPredicted RBP9.51□□□□□ -0.89
DDX56-211ENST00000479602 YWHAEP62258 255 aaKnown RBP9.51□□□□□ -0.89
DDX56-211ENST00000479602 PFKPQ01813 784 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TRPC3Q13507 836 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ZNF699Q32M78 642 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ZNF667Q5HYK9 610 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TPGS2Q68CL5 300 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ZNF280DQ6N043 979 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 DPY19L2P1Q6NXN4 242 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TRIM65Q6PJ69 517 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 TAS1R2Q8TE23 839 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ELSPBP1Q96BH3 223 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 FUBP3Q96I24 572 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDX56-211ENST00000479602 SENP8Q96LD8 212 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ACBD6Q9BR61 282 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 DNAI2Q9GZS0 605 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ABCB6Q9NP58 842 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 LTB4R2Q9NPC1 389 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 DLL3Q9NYJ7 618 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 CEP72Q9P209 647 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 AGAP1Q9UPQ3 857 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 R3HCC1Q9Y3T6 440 aaKnown RBP9.51□□□□□ -0.89
DDX56-211ENST00000479602 NUB1Q9Y5A7 615 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 ITIH6Q6UXX5 1313 aa9.51□□□□□ -0.89
DDX56-211ENST00000479602 PTPRDP23468 1912 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 FAM170BA6NMN3 283 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 PPEF2O14830 753 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 HUS1O60921 280 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 CST3P01034 146 aaPredicted RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 TPM3P06753 285 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 PCSK1P29120 753 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 PBX1P40424 430 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 PIK3CAP42336 1068 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 MAGEA9P43362 315 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 MTIF2P46199 727 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 BIRC3Q13489 604 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 MAPRE1Q15691 268 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 EXOC3L4Q17RC7 722 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 CFAP221Q4G0U5 840 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 DCAF17Q5H9S7 520 aaPredicted RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 FAM78AQ5JUQ0 283 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 GBP6Q6ZN66 633 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 CRYBG2Q8N1P7 616 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 EHBP1Q8NDI1 1231 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 KBTBD7Q8WVZ9 684 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 RMDN1Q96DB5 314 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 TCEAL4Q96EI5 215 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 MCRS1Q96EZ8 462 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 ASB16Q96NS5 453 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 PKMYT1Q99640 499 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 RTN4Q9NQC3 1192 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 PRMT8Q9NR22 394 aaPredicted RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 AFF4Q9UHB7 1163 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 L1RE1Q9UN81 338 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 SIK3Q9Y2K2 1263 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 MRPS23Q9Y3D9 190 aaKnown RBP9.5□□□□□ -0.89
DDX56-211ENST00000479602 CACNA1BQ00975 2339 aa9.5□□□□□ -0.89
DDX56-211ENST00000479602 COL4A3Q01955 1670 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 GOLGA6L19H0YKK7 550 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 STK25O00506 426 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 CEBPBP17676 345 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 CD72P21854 359 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 TARSP26639 723 aaKnown RBP9.49□□□□□ -0.89
DDX56-211ENST00000479602 ZNF132P52740 706 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 MYL6P60660 151 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 TNNC1P63316 161 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
DDX56-211ENST00000479602 GPR17Q13304 367 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 ARID5BQ14865 1188 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 NFE2Q16621 373 aaPredicted RBP9.49□□□□□ -0.89
DDX56-211ENST00000479602 SOWAHAQ2M3V2 549 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 WDR72Q3MJ13 1102 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 WDR44Q5JSH3 913 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 TCERG1LQ5VWI1 586 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 TMEM130Q8N3G9 435 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 PDCL2Q8N4E4 241 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 DCLK2Q8N568 766 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 SHC3Q92529 594 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 RUBCNQ92622 972 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 SEMA4DQ92854 862 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 NT5C1BQ96P26 610 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 KXD1Q9BQD3 176 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 NAA15Q9BXJ9 866 aaKnown RBP9.49□□□□□ -0.89
DDX56-211ENST00000479602 CRISPLD1Q9H336 500 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms