RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 E4F1Q66K89 784 aaPredicted RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 IQCEQ6IPM2 695 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 PDXDC1Q6P996 788 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 GJB7Q6PEY0 223 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 ALKAL1Q6UXT8 129 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 FAM43BQ6ZT52 329 aaPredicted RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 MRPL10Q7Z7H8 261 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 NT5DC4Q86YG4 428 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 TMEM139Q8IV31 216 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 CNGA4Q8IV77 575 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 HACE1Q8IYU2 909 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 CXorf38Q8TB03 319 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 UBASH3BQ8TF42 649 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 CPLX3Q8WVH0 158 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 WFDC12Q8WWY7 111 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 ANKRD36BP1Q96IX9 119 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 PANX2Q96RD6 677 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 ADAM2Q99965 735 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 APOL6Q9BWW8 343 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 NAA15Q9BXJ9 866 aaKnown RBP7.15□□□□□ -1.26
USP48-208ENST00000479177 EDEM3Q9BZQ6 932 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 CXCL16Q9H2A7 254 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 RAB20Q9NX57 234 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 APEX2Q9UBZ4 518 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 PARP2Q9UGN5 583 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 SIX4Q9UIU6 781 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 DERAQ9Y315 318 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 DAAM1Q9Y4D1 1078 aa7.15□□□□□ -1.26
USP48-208ENST00000479177 A0A0U1RQF3 1178 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 MEIS3P2A8K0S8 358 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TDRD15B5MCY1 1934 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 C9IYK1 514 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 PTGESO14684 152 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 KIAA0355O15063 1070 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 INPPL1O15357 1258 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ZC3H11AO75152 810 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP48-208ENST00000479177 PARNO95453 639 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 ASS1P00966 412 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 ITGA4P13612 1032 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 HNRNPH3P31942 346 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 CYP2C18P33260 490 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 CD68P34810 354 aaPredicted RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 KRT9P35527 623 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 MKI67P46013 3256 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 GUCY2FP51841 1108 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 CCL23P55773 120 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 JAM2P57087 298 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 POLR2FP61218 127 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 CCZ1BP86790 482 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 CCZ1P86791 482 aaPredicted RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ZBTB6Q15916 424 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 MEA1Q16626 185 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 GLRA4Q5JXX5 417 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 KIAA0319Q5VV43 1072 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 SCARA3Q6AZY7 606 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 AGMOQ6ZNB7 445 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TRAPPC11Q7Z392 1133 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ECHDC2Q86YB7 292 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ARHGEF19Q8IW93 802 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 LRRC8AQ8IWT6 810 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TMEM130Q8N3G9 435 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 SEPT8Q92599 483 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 APBB2Q92870 758 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 LPPQ93052 612 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 VWCEQ96DN2 955 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 SCLYQ96I15 445 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 MEGF10Q96KG7 1140 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ZMAT2Q96NC0 199 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 NT5C1BQ96P26 610 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TSPAN18Q96SJ8 248 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 PI4K2AQ9BTU6 479 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 FTHL17Q9BXU8 183 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 APOBEC3GQ9HC16 384 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 RGS18Q9NS28 235 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 C1orf112Q9NSG2 853 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ABHD10Q9NUJ1 306 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TMEM39AQ9NV64 488 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 TUBGCP4Q9UGJ1 667 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 ITGA11Q9UKX5 1188 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 MYO6Q9UM54 1294 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 GIT1Q9Y2X7 761 aa7.14□□□□□ -1.27
USP48-208ENST00000479177 LUC7L2Q9Y383 392 aaKnown RBP7.14□□□□□ -1.27
USP48-208ENST00000479177 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.14□□□□□ -1.27
USP48-208ENST00000479177 A0A096LPE4 126 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 SMIM28A0A1B0GU29 152 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 A0A1W2PPZ6 126 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 TRIM43BA6NCK2 446 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 LRRC53A6NM62 1247 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 F8VZ95 297 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 F8W735 103 aaPredicted RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 TIMP1P01033 207 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 ITGB3P05106 788 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 ITGB8P26012 769 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 POLR2BP30876 1174 aaKnown RBP7.13□□□□□ -1.27
USP48-208ENST00000479177 RFC2P35250 354 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 MLH1P40692 756 aa7.13□□□□□ -1.27
USP48-208ENST00000479177 MYL6P60660 151 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms