RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 STKLD1Q8NE28 680 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 SLC35F5Q8WV83 523 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 ARNTL2Q8WYA1 636 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 KLHL5Q96PQ7 755 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 TCF25Q9BQ70 676 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 ISCUQ9H1K1 167 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 CSNK1G1Q9HCP0 422 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 KRT82Q9NSB4 513 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 FNIP2Q9P278 1114 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 IRAK3Q9Y616 596 aa13.88□□□□□ -0.19
CHD3-210ENST00000479080 TCRBV5S1A1TA0A578 114 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 USP27XA6NNY8 438 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 TMCO5BA8MYB1 307 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 MED7O43513 233 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 AKR1B10O60218 316 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 SOAT2O75908 522 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 ABLIM3O94929 683 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 CPB1P15086 417 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 CYP2F1P24903 491 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 RPL34P49207 117 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 PDCLQ13371 301 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 RAB33AQ14088 237 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 STILQ15468 1287 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 LRIT3Q3SXY7 679 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 ACAD10Q6JQN1 1059 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 KIAA1841Q6NSI8 718 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 PMF1Q6P1K2 205 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 ALKBH5Q6P6C2 394 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 ADGRD2Q7Z7M1 963 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 C17orf53Q8N3J3 647 aaPredicted RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 ARHGEF26Q96DR7 871 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHD3-210ENST00000479080 DUSP16Q9BY84 665 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 TLR9Q9NR96 1032 aa13.87□□□□□ -0.19
CHD3-210ENST00000479080 MRPL17Q9NRX2 175 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 SEPT11Q9NVA2 429 aaKnown RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 ABI2Q9NYB9 513 aaPredicted RBP13.87□□□□□ -0.19
CHD3-210ENST00000479080 PATJQ8NI35 1801 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 AP1G2O75843 785 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 CXCL14O95715 111 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 LSM8O95777 96 aaKnown RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 ERBB2P04626 1255 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 GZMAP12544 262 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 NPR3P17342 541 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 MMP8P22894 467 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 CYLC1P35663 651 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 ARHGAP25P42331 645 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 RGS7P49802 495 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 BCAT1P54687 386 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 MAP3K7CLP57077 242 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 BST2Q10589 180 aaKnown RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 HS1BP3Q53T59 392 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 CCDC122Q5T0U0 273 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 SDHAF4Q5VUM1 108 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 TRIM72Q6ZMU5 477 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 TMC7Q7Z402 723 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 PIGZQ86VD9 579 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 PHF13Q86YI8 300 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 REXO1L1PQ8IX06 675 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 MCOLN2Q8IZK6 566 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 FEZF2Q8TBJ5 459 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 MED10Q9BTT4 135 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 SLC4A5Q9BY07 1137 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 LACRTQ9GZZ8 138 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 TTYH1Q9H313 450 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 SLC28A3Q9HAS3 691 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 TRIM10Q9UDY6 481 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 CHORDC1Q9UHD1 332 aaPredicted RBP13.86□□□□□ -0.19
CHD3-210ENST00000479080 SALL4Q9UJQ4 1053 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 PCDHB5Q9Y5E4 795 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 PCDHA13Q9Y5I0 950 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 NCANO14594 1321 aa13.86□□□□□ -0.19
CHD3-210ENST00000479080 PLXNA3P51805 1871 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 A0A1W2PPC1 479 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 F8VP50 259 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 PIK3R2O00459 728 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 TNFRSF10BO14763 440 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 RTN2O75298 545 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 FTLP02792 175 aaPredicted RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 FAM200BP0CF97 657 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 SETSIPP0DME0 302 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 HAPLN1P10915 354 aaPredicted RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 ATF6P18850 670 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms