RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 SERPINA1P01009 418 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RASGEF1BQ0VAM2 473 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 BIKQ13323 160 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
USF3-202ENST00000478658 KPNB1Q14974 876 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 POLD3Q15054 466 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 VPS26BQ4G0F5 336 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SMYD5Q6GMV2 418 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RWDD4Q6NW29 188 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ARHGEF19Q8IW93 802 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 EMC1Q8N766 993 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 OR52L1Q8NGH7 329 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 FMO2Q99518 471 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 HIPK3Q9H422 1215 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 POLR1BQ9H9Y6 1135 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 TIMMDC1Q9NPL8 285 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 BFARQ9NZS9 450 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 DUSP12Q9UNI6 340 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 THRAP3Q9Y2W1 955 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 PCDHGB1Q9Y5G3 927 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ARL5CA6NH57 179 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 IL1AP01583 271 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RAP1GAPP47736 663 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CRISP1P54107 249 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ASPRV1Q53RT3 343 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 RBM20Q5T481 1227 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 RASSF3Q86WH2 238 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 PLEKHM2Q8IWE5 1019 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 DCAKDQ8WVC6 231 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 EEF1AKMT1Q8WVE0 214 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CNKSR1Q969H4 720 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 DGCR14Q96DF8 476 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 TMEM121BQ9BXQ6 578 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ADGRA2Q96PE1 1338 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 UBA6A0AVT1 1052 aaPredicted RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 RPS6KA5O75582 802 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 PRKAR2AP13861 404 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 RBM34P42696 430 aaKnown RBP5.62□□□□□ -1.51
USF3-202ENST00000478658 ADCY1Q08828 1119 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SPDYAQ5MJ70 313 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 CACTIN-AS1Q8N1I8 211 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SH2D3CQ8N5H7 860 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 OR8K1Q8NGG5 319 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 SCFD2Q8WU76 684 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 ADIPOR1Q96A54 375 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 KCND2Q9NZV8 630 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 GRIN2DO15399 1336 aa5.62□□□□□ -1.51
USF3-202ENST00000478658 A0A1B0GVC2 190 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 HNRNPDLO14979 420 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 PHF2O75151 1096 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 REM1O75628 298 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SCGNO76038 276 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ACSL3O95573 720 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PRLP01236 227 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC2A4P14672 509 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 HSD17B2P37059 387 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SLC16A1P53985 500 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 POLE2P56282 527 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 XKR9Q5GH70 373 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 NBPF12Q5TAG4 269 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 DENND5AQ6IQ26 1287 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KLHL35Q6PF15 583 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C3P1Q6ZMU1 363 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PM20D2Q8IYS1 436 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ZNF654Q8IZM8 581 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 OXR1Q8N573 874 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 C8orf4Q9NR00 106 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CLEC4AQ9UMR7 237 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SAMD4AQ9UPU9 718 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 SH3BP1Q9Y3L3 701 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 FAM172BPA6NC97 362 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KCNK3O14649 394 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 MDM4O15151 490 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PDYNP01213 254 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ANXA6P08133 673 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CLUP10909 449 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CDH4P55283 916 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SP4Q02446 784 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 HIC1Q14526 733 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 KCTD19Q17RG1 926 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 ACCSLQ4AC99 568 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ERMARDQ5T6L9 678 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 BROXQ5VW32 411 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 PDXDC2PQ6P474 469 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DPP8Q6V1X1 898 aaPredicted RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 C10orf107Q8IVU9 208 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 IZUMO1Q8IYV9 350 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SUN3Q8TAQ9 357 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 NOL6Q9H6R4 1146 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 PSME2Q9UL46 239 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 DYRK1BQ9Y463 629 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 ACEP12821 1306 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 CDC7O00311 574 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 RNF113AO15541 343 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 CTIFO43310 598 aaKnown RBP5.61□□□□□ -1.51
USF3-202ENST00000478658 KRT34O76011 436 aa5.61□□□□□ -1.51
USF3-202ENST00000478658 SERPINA3P01011 423 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms