RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RAPGEFL1Q9UHV5 662 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 ZDBF2Q9HCK1 2354 aa16.59■□□□□ 0.25
HMGA1-206ENST00000478214 GOLGA6L22H0YM25 854 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 GNA14O95837 355 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 FMO5P49326 533 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 WDR44Q5JSH3 913 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 PAQR9Q6ZVX9 377 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 FAM35AQ86V20 835 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 TRIM59Q8IWR1 403 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 SIX5Q8N196 739 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 FBXL6Q8N531 539 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 C12orf29Q8N999 325 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 RSPRY1Q96DX4 576 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 TRMT2BQ96GJ1 504 aaKnown RBP16.58■□□□□ 0.24
HMGA1-206ENST00000478214 SPATA17Q96L03 361 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 C8orf48Q96LL4 319 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 MYRFLQ96LU7 910 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 ARID3AQ99856 593 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 TASP1Q9H6P5 420 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 SLC2A4RGQ9NR83 387 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 WNT16Q9UBV4 365 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 CA14Q9ULX7 337 aa16.58■□□□□ 0.24
HMGA1-206ENST00000478214 NCANO14594 1321 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 TRIM66O15016 1216 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 CILPO75339 1184 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 TADA3O75528 432 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 CCDC130P13994 396 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 COL9A1P20849 921 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 ANXA13P27216 316 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 USP46P62068 366 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 GRM2Q14416 872 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 DPCR1Q3MIW9 517 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 IER5LQ5T953 404 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 ARID3BQ8IVW6 561 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-206ENST00000478214 FUKQ8N0W3 1084 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 NT5C1AQ9BXI3 368 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 SLC46A2Q9BY10 475 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 FAM49BQ9NUQ9 324 aa16.57■□□□□ 0.24
HMGA1-206ENST00000478214 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
HMGA1-206ENST00000478214 ATP8B3O60423 1300 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 KRBA1A5PL33 1030 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 HEPACAM2A8MVW5 462 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 FGFR1OPO95684 399 aaKnown RBP16.56■□□□□ 0.24
HMGA1-206ENST00000478214 MARSP56192 900 aaKnown RBP16.56■□□□□ 0.24
HMGA1-206ENST00000478214 LRMPQ12912 555 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 TXNDC8Q6A555 127 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 VITQ6UXI7 678 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 DENND5BQ6ZUT9 1274 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 SUGP1Q8IWZ8 645 aaKnown RBP16.56■□□□□ 0.24
HMGA1-206ENST00000478214 SLC2A14Q8TDB8 520 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 MRPS31Q92665 395 aaKnown RBP16.56■□□□□ 0.24
HMGA1-206ENST00000478214 FAXDC2Q96IV6 333 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 CEP295NLQ96MC4 621 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 KCNK16Q96T55 309 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 SMG9Q9H0W8 520 aaKnown RBP16.56■□□□□ 0.24
HMGA1-206ENST00000478214 MFSD1Q9H3U5 465 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 CISHQ9NSE2 258 aa16.56■□□□□ 0.24
HMGA1-206ENST00000478214 PMM2O15305 246 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 AP1G2O75843 785 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 PRAMEF12O95522 483 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 NPR3P17342 541 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 KCNH2Q12809 1159 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 ZNF394Q53GI3 561 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 MFSD6LQ8IWD5 586 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 MAB21L3Q8N8X9 362 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 FLCNQ8NFG4 579 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 SMARCD1Q96GM5 515 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 CNOT6LQ96LI5 555 aaKnown RBP16.55■□□□□ 0.24
HMGA1-206ENST00000478214 LRRC3BQ96PB8 259 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 SMOQ99835 787 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 TRMT61BQ9BVS5 477 aaKnown RBP16.55■□□□□ 0.24
HMGA1-206ENST00000478214 TTLL2Q9BWV7 592 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 ARHGEF3Q9NR81 526 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 KRT82Q9NSB4 513 aa16.55■□□□□ 0.24
HMGA1-206ENST00000478214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.55■□□□□ 0.24
HMGA1-206ENST00000478214 BEST1O76090 585 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 AFPP02771 609 aaKnown RBP16.54■□□□□ 0.24
HMGA1-206ENST00000478214 PSMC3P17980 439 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 DDX6P26196 483 aaKnown RBP eCLIP16.54■□□□□ 0.24
HMGA1-206ENST00000478214 ADORA2BP29275 332 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 WEE1P30291 646 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 GDI1P31150 447 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 VCPP55072 806 aaKnown RBP16.54■□□□□ 0.24
HMGA1-206ENST00000478214 CUL2Q13617 745 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 CWF19L1Q69YN2 538 aaKnown RBP16.54■□□□□ 0.24
HMGA1-206ENST00000478214 MON1AQ86VX9 555 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 IRF2BP1Q8IU81 584 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 CMTM8Q8IZV2 173 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 LMO3Q8TAP4 145 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 DEPDC1BQ8WUY9 529 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 E2F7Q96AV8 911 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 BRD9Q9H8M2 597 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 TRPC7Q9HCX4 862 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 DMAP1Q9NPF5 467 aaPredicted RBP16.54■□□□□ 0.24
HMGA1-206ENST00000478214 ZMYM5Q9UJ78 669 aa16.54■□□□□ 0.24
HMGA1-206ENST00000478214 PTPRDP23468 1912 aa16.53■□□□□ 0.24
HMGA1-206ENST00000478214 DPYSL4O14531 572 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms