RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MED10Q9BTT4 135 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 ABCB6Q9NP58 842 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 ASAH2Q9NR71 780 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 CISHQ9NSE2 258 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 HSFX1Q9UBD0 423 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 MAGED2Q9UNF1 606 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
HDAC6-222ENST00000478095 NR2E1Q9Y466 385 aa10.93□□□□□ -0.66
HDAC6-222ENST00000478095 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 F8VP50 259 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 SLC9A1P19634 815 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 EEF1GP26641 437 aaKnown RBP10.92□□□□□ -0.66
HDAC6-222ENST00000478095 ADORA2BP29275 332 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 GRIK1P39086 918 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 RPL10AP62906 217 aaKnown RBP10.92□□□□□ -0.66
HDAC6-222ENST00000478095 NCAPHQ15003 741 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 NFKBIBQ15653 356 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 TAF12Q16514 161 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 ZSCAN23Q3MJ62 389 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 VWA3BQ502W6 1294 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 MIIPQ5JXC2 388 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 PRSS36Q5K4E3 855 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 CYP4A22Q5TCH4 519 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 CDKAL1Q5VV42 579 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 GJB7Q6PEY0 223 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 PAQR9Q6ZVX9 377 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 DNAJB7Q7Z6W7 309 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-222ENST00000478095 FAM35AQ86V20 835 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 TMC8Q8IU68 726 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 RNF135Q8IUD6 432 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 NPAS3Q8IXF0 933 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 SLC2A14Q8TDB8 520 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 FGF13Q92913 245 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 FUCA2Q9BTY2 467 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 LRRC3Q9BY71 257 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 NDST4Q9H3R1 872 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 TMEM30AQ9NV96 361 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 LIMD1Q9UGP4 676 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 USTQ9Y2C2 406 aa10.92□□□□□ -0.66
HDAC6-222ENST00000478095 C5orf42Q9H799 3197 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 SLC38A8A6NNN8 435 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 MOSPD3O75425 235 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 LETM1O95202 739 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 ASGR2P07307 311 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 TBXAS1P24557 533 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 ANXA13P27216 316 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 MAGEA11P43364 429 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 CYP4F8P98187 520 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 KRT31Q15323 416 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 TEAD2Q15562 447 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 EXOC3L4Q17RC7 722 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 SKOR2Q2VWA4 1001 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 STXBP5Q5T5C0 1151 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 PHLDB3Q6NSJ2 640 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 TRIM65Q6PJ69 517 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 VSTM1Q6UX27 236 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 GBP6Q6ZN66 633 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 ITIH5Q86UX2 942 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 FUKQ8N0W3 1084 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 CRYBG2Q8N1P7 616 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 SHKBP1Q8TBC3 707 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 RSAD2Q8WXG1 361 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 MCRS1Q96EZ8 462 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 TMEM176AQ96HP8 235 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 FAXDC2Q96IV6 333 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 HEXIM2Q96MH2 286 aaKnown RBP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 NAT10Q9H0A0 1025 aaKnown RBP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 VPS16Q9H269 839 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 KRT82Q9NSB4 513 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC6-222ENST00000478095 MUTYHQ9UIF7 546 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 CDH7Q9ULB5 785 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 ASB3Q9Y575 518 aa10.91□□□□□ -0.66
HDAC6-222ENST00000478095 ATP8B3O60423 1300 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 TNFRSF10AO00220 468 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 DLL1O00548 723 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF197O14709 1029 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 TRIM66O15016 1216 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 AP1G2O75843 785 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 CALCAP01258 141 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 CSH1P0DML2 217 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 CSH2P0DML3 217 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 LAMP2P13473 410 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 HMGA1P17096 107 aaKnown RBP10.9□□□□□ -0.66
HDAC6-222ENST00000478095 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.66
HDAC6-222ENST00000478095 GABRR2P28476 465 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 ZNF165P49910 485 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 RAD23BP54727 409 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 EPHA5P54756 1037 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 YWHAEP62258 255 aaKnown RBP10.9□□□□□ -0.66
HDAC6-222ENST00000478095 IFRD2Q12894 506 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-222ENST00000478095 TMEM270Q6UE05 265 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 GAREM2Q75VX8 874 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 DHX40Q8IX18 779 aaKnown RBP10.9□□□□□ -0.66
HDAC6-222ENST00000478095 ZDHHC14Q8IZN3 488 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 UBR7Q8N806 425 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 SLC4A11Q8NBS3 891 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 LEMD2Q8NC56 503 aa10.9□□□□□ -0.66
HDAC6-222ENST00000478095 JAKMIP2Q96AA8 810 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms