RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 NOCTQ9UK39 431 aaKnown RBP17.16■□□□□ 0.34
COL11A2-206ENST00000477772 COG5Q9UP83 839 aa17.16■□□□□ 0.34
COL11A2-206ENST00000477772 F8W810 466 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 PPEF2O14830 753 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 TTI1O43156 1089 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 ZC3H11AO75152 810 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL11A2-206ENST00000477772 TMEM191BP0C7N4 346 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 MYZAPP0CAP1 466 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 NR1D1P20393 614 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 GBP1P32455 592 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 CLCNKBP51801 687 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 DRG2P55039 364 aaKnown RBP17.15■□□□□ 0.34
COL11A2-206ENST00000477772 CEP85LQ5SZL2 805 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 EPS8L1Q8TE68 723 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 FAM81BQ96LP2 452 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 RASAL2Q9UJF2 1139 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 ALG6Q9Y672 507 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 NFS1Q9Y697 457 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 DAPK3O43293 454 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 CST3P01034 146 aaPredicted RBP17.15■□□□□ 0.34
COL11A2-206ENST00000477772 CA3P07451 260 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 UPP1Q16831 310 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 ZACNQ401N2 412 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
COL11A2-206ENST00000477772 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 BEST2Q8NFU1 509 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 RUNDC3BQ96NL0 473 aa17.15■□□□□ 0.34
COL11A2-206ENST00000477772 FAM193BQ96PV7 902 aaPredicted RBP17.15■□□□□ 0.34
COL11A2-206ENST00000477772 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 LINC01553A4QN01 128 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 EBAG9O00559 213 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 VNN1O95497 513 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 ITGB3P05106 788 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 GALTP07902 379 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 LRPAP1P30533 357 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 CTNNA1P35221 906 aaKnown RBP17.14■□□□□ 0.33
COL11A2-206ENST00000477772 SLC11A1P49279 550 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 BCAR1P56945 870 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 DR1Q01658 176 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 UAP1Q16222 522 aaPredicted RBP17.14■□□□□ 0.33
COL11A2-206ENST00000477772 AGBL2Q5U5Z8 902 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 C9orf57Q5W0N0 161 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 TMC3Q7Z5M5 1100 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 C3orf58Q8NDZ4 430 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 BCAS4Q8TDM0 211 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 CLP1Q92989 425 aaKnown RBP17.14■□□□□ 0.33
COL11A2-206ENST00000477772 ZSWIM1Q9BR11 485 aa17.14■□□□□ 0.33
COL11A2-206ENST00000477772 NT5C1B-RDH14C9J2C7 533 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 PIRO00625 290 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 NRP1O14786 923 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 XPOTO43592 962 aaKnown RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 TNNC2P02585 160 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 CYP1A2P05177 515 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ITGB1P05556 798 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 CHRNB2P17787 502 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 CHRNA3P32297 505 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 OR1G1P47890 313 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 AP3M2P53677 418 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 CORO7P57737 925 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 CD300LGQ6UXG3 332 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ENOSF1Q7L5Y1 443 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 TAS1R2Q8TE23 839 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 KREMEN1Q96MU8 473 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 NT5C1BQ96P26 610 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ERP44Q9BS26 406 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 UVRAGQ9P2Y5 699 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 FEZ2Q9UHY8 353 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 LCMT1Q9UIC8 334 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 PHF2O75151 1096 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 DUPD1Q68J44 220 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 NOP9Q86U38 636 aaKnown RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ALG3Q92685 438 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ELMO3Q96BJ8 720 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 RASSF4Q9H2L5 321 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 GTF3C4Q9UKN8 822 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 AGAP1Q9UPQ3 857 aa17.13■□□□□ 0.33
COL11A2-206ENST00000477772 PRG3Q9Y2Y8 225 aaPredicted RBP17.13■□□□□ 0.33
COL11A2-206ENST00000477772 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 PODXLO00592 558 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 PPFIA2O75334 1257 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 ALDH2P05091 517 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 CTNNA2P26232 953 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
COL11A2-206ENST00000477772 CDR2Q01850 454 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 SLC20A2Q08357 652 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 ZNF844Q08AG5 666 aa17.12■□□□□ 0.33
COL11A2-206ENST00000477772 SPOUT1Q5T280 376 aaKnown RBP17.12■□□□□ 0.33
COL11A2-206ENST00000477772 SEL1L2Q5TEA6 688 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms