RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TLDC2A0PJX2 215 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 CFAP69A5D8W1 941 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 TBX3O15119 743 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 MAGEB2O15479 319 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 SNX2O60749 519 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 SREBF1P36956 1147 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 NOP14P78316 857 aaKnown RBP13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 NIPAL4Q0D2K0 466 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 PDK3Q15120 406 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF449Q6P9G9 518 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 RASSF3Q86WH2 238 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 CENPSQ8N2Z9 138 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 OSCP1Q8WVF1 389 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 LPAR1Q92633 364 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 PEX13Q92968 403 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 MCUR1Q96AQ8 359 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 AIFM2Q9BRQ8 373 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 TRIM9Q9C026 710 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 C10orf88Q9H8K7 445 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 GPAMQ9HCL2 828 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 AGPAT5Q9NUQ2 364 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 MRGBPQ9NV56 204 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 SALL4Q9UJQ4 1053 aa13.23□□□□□ -0.29
RTFDC1-207ENST00000477573 SYCE1LA8MT33 242 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 E9PMD0 336 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 PSMA7O14818 248 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 RARGP13631 454 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 DDX5P17844 614 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 TCEA1P23193 301 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 PTGER2P43116 358 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 NR1H2P55055 460 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ASIC1P78348 528 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 STRN3Q13033 797 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 GRB10Q13322 594 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 MOGSQ13724 837 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT81Q14533 505 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 DCAF15Q66K64 600 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 GIMAP8Q8ND71 665 aaPredicted RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF398Q8TD17 642 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 HAS1Q92839 578 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 TTC1Q99614 292 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 SQORQ9Y6N5 450 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 WASF2Q9Y6W5 498 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 POTEMA6NI47 508 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 RASGRF2O14827 1237 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 XPOTO43592 962 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 KLRC4O43908 158 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 TGFB3P10600 412 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 VCLP18206 1134 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 STX2P32856 288 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ENTPD1P49961 510 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 B2MP61769 119 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 AUHQ13825 339 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ZYXQ15942 572 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 PPP2R5EQ16537 467 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 KIAA1755Q5JYT7 1200 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 CNNM4Q6P4Q7 775 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF341Q9BYN7 854 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 SLC38A7Q9NVC3 462 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 RSL24D1Q9UHA3 163 aaKnown RBP13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 HACL1Q9UJ83 578 aa13.22□□□□□ -0.29
RTFDC1-207ENST00000477573 C15orf38-AP3S2A0A0A6YYH1 394 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 PGRMC1O00264 195 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 BUD23O43709 281 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 EXOC3O60645 756 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 FKBP6O75344 327 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 CBX6O95503 412 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 FYNP06241 537 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 POLR2MP0CAP2 368 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF76P36508 570 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 CDK9P50750 372 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 POU5F1Q01860 360 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 CHRNEQ04844 493 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 PCSK7Q16549 785 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 SGO2Q562F6 1265 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 NDUFAF5Q5TEU4 345 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 C6orf163Q5TEZ5 329 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 C4orf22Q6V702 233 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 TMC7Q7Z402 723 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 ARPINQ7Z6K5 226 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 CSGALNACT2Q8N6G5 542 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 METTL25Q8N6Q8 603 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 RAD54LQ92698 747 aa13.21□□□□□ -0.29
RTFDC1-207ENST00000477573 FAM20AQ96MK3 541 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms