RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 CFAP157Q5JU67 520 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 LRRC38Q5VT99 294 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 TMEM179Q6ZVK1 233 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 PHF13Q86YI8 300 aaPredicted RBP18.56■□□□□ 0.56
CCM2-207ENST00000475551 PALM2Q8IXS6 379 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 SP8Q8IXZ3 490 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 NAT8LQ8N9F0 302 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 FBXO36Q8NEA4 188 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 FEZF2Q8TBJ5 459 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 FBXL18Q96ME1 805 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 SENP7Q9BQF6 1050 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 TMEM121Q9BTD3 319 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 EPB41L1Q9H4G0 881 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 NDUFA13Q9P0J0 144 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 PIAS1O75925 651 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 ATP5BP06576 529 aaKnown RBP18.56■□□□□ 0.56
CCM2-207ENST00000475551 VIL1P09327 827 aaKnown RBP18.56■□□□□ 0.56
CCM2-207ENST00000475551 NOMO3P69849 1222 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 RHPN2Q8IUC4 686 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 ZFPM1Q8IX07 1006 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 CERS5Q8N5B7 392 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 FAM172AQ8WUF8 416 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 CPT1BQ92523 772 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 SERAC1Q96JX3 654 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 CLPTM1LQ96KA5 538 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 C7orf26Q96N11 449 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 PI4K2AQ9BTU6 479 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 C1orf112Q9NSG2 853 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 PRR12Q9ULL5 1215 aa18.56■□□□□ 0.56
CCM2-207ENST00000475551 hCG_1818297A0A087WSY0 165 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 E5RJQ4 531 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 IFNB1P01574 187 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 ETS2P15036 469 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 UBXN2AP68543 259 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 XIAPP98170 497 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 GAD2Q05329 585 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 ASPHQ12797 758 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 MED21Q13503 144 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 MAP7Q14244 749 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
CCM2-207ENST00000475551 ZFYVE27Q5T4F4 411 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 RAPH1Q70E73 1250 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 RASSF3Q86WH2 238 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 SLC35B2Q8TB61 432 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 HIC2Q96JB3 615 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 CYTH2Q99418 400 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 S100A14Q9HCY8 104 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 PPME1Q9Y570 386 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 ATP9BO43861 1147 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 USP1O94782 785 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 IMPDH2P12268 514 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 VAV1P15498 845 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 STIP1P31948 543 aaKnown RBP18.55■□□□□ 0.56
CCM2-207ENST00000475551 PEX3P56589 373 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 RPL26P61254 145 aaKnown RBP18.55■□□□□ 0.56
CCM2-207ENST00000475551 ENPEPQ07075 957 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 CYP24A1Q07973 514 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 MYBPC3Q14896 1274 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 ANKRD22Q5VYY1 191 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 APOBEC3HQ6NTF7 200 aaKnown RBP18.55■□□□□ 0.56
CCM2-207ENST00000475551 PPP1R2P3Q6NXS1 205 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 MIER3Q7Z3K6 550 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 SPATA24Q86W54 205 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 TRIM42Q8IWZ5 723 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 WWP1Q9H0M0 922 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 PARVAQ9NVD7 372 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 PPARGC1AQ9UBK2 798 aaKnown RBP18.55■□□□□ 0.56
CCM2-207ENST00000475551 SH3BP1Q9Y3L3 701 aa18.55■□□□□ 0.56
CCM2-207ENST00000475551 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 OPHN1O60890 802 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 LGR5O75473 907 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 UQCRBP14927 111 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
CCM2-207ENST00000475551 PTK7Q13308 1070 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 TFDP3Q5H9I0 405 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 TATDN1Q6P1N9 297 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 HHIPL2Q6UWX4 724 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 CCDC106Q9BWC9 280 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 PIM2Q9P1W9 311 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 TBX20Q9UMR3 447 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 ASLP04424 464 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 HARSP12081 509 aaKnown RBP18.54■□□□□ 0.56
CCM2-207ENST00000475551 GRIA2P42262 883 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 RBM5P52756 815 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCM2-207ENST00000475551 PLCB3Q01970 1234 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 ITGA9Q13797 1035 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 DHDDSQ86SQ9 333 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 MAP4K3Q8IVH8 894 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 RBM12BQ8IXT5 1001 aaKnown RBP18.54■□□□□ 0.56
CCM2-207ENST00000475551 ABRAQ8N0Z2 381 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 PIP4K2CQ8TBX8 421 aa18.54■□□□□ 0.56
CCM2-207ENST00000475551 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.54■□□□□ 0.56
CCM2-207ENST00000475551 I3L4J1 428 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 SPATA31D3P0C874 917 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 TCF4P15884 667 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 KDSRQ06136 332 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 SPATA31D4Q6ZUB0 917 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 TRIM74Q86UV6 250 aa18.53■□□□□ 0.56
CCM2-207ENST00000475551 TRIM73Q86UV7 250 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms