RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 YME1L1Q96TA2 773 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 NUP85Q9BW27 656 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 CRTAC1Q9NQ79 661 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 STRIP2Q9ULQ0 834 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 JRKLQ9Y4A0 524 aa21.53■■□□□ 1.04
CDHR3-210ENST00000474330 SPTBN5Q9NRC6 3674 aaKnown RBP21.53■■□□□ 1.04
CDHR3-210ENST00000474330 TLL1O43897 1013 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 YWHAHQ04917 246 aaPredicted RBP21.52■■□□□ 1.04
CDHR3-210ENST00000474330 PDCLQ13371 301 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 PPP2R2DQ66LE6 453 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 PLEKHA7Q6IQ23 1121 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 SPRED2Q7Z698 418 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 SLFN11Q7Z7L1 901 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 LRRC57Q8N9N7 239 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 SLC2A14Q8TDB8 520 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 STK32AQ8WU08 396 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 SLC35F5Q8WV83 523 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 CPXM1Q96SM3 734 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 MRPL47Q9HD33 250 aaKnown RBP21.52■■□□□ 1.04
CDHR3-210ENST00000474330 VWA8A3KMH1 1905 aa21.52■■□□□ 1.04
CDHR3-210ENST00000474330 OAZ2O95190 189 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 ADORA2BP29275 332 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 GABRB2P47870 512 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 BCAT1P54687 386 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 TAP1Q03518 808 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 ELAVL2Q12926 359 aaKnown RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 BTG3Q14201 252 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 SYCE1Q8N0S2 351 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 FUKQ8N0W3 1084 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 MYCBPAPQ8TBZ2 947 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 ZNF564Q8TBZ8 553 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 C18orf8Q96DM3 657 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 RAD9AQ99638 391 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 ZBED2Q9BTP6 218 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 PRDM12Q9H4Q4 367 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 CHORDC1Q9UHD1 332 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 SF3B1O75533 1304 aaKnown RBP eCLIP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 XIRP2A4UGR9 3374 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 TCRBV5S1A1TA0A578 114 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 MYBPHLA2RUH7 354 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 BUB1BO60566 1050 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 TKTP29401 623 aaKnown RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 ALDH7A1P49419 539 aaKnown RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 GSCP56915 257 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 HTRA4P83105 476 aaPredicted RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 PLCB3Q01970 1234 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 PDE4CQ08493 712 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 BST2Q10589 180 aaKnown RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 MDH1BQ5I0G3 518 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 INTS6LQ5JSJ4 861 aaKnown RBP21.51■■□□□ 1.03
CDHR3-210ENST00000474330 FUT10Q6P4F1 479 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 FAM171BQ6P995 826 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 PAQR9Q6ZVX9 377 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 PARVAQ9NVD7 372 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 WDR35Q9P2L0 1181 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 SCINQ9Y6U3 715 aa21.51■■□□□ 1.03
CDHR3-210ENST00000474330 NT5C1B-RDH14C9J2C7 533 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 MAMLD1Q13495 774 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 ADGRE1Q14246 886 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 PAPD7Q5XG87 772 aaKnown RBP21.5■■□□□ 1.03
CDHR3-210ENST00000474330 LLGL2Q6P1M3 1020 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 IPO4Q8TEX9 1081 aaKnown RBP21.5■■□□□ 1.03
CDHR3-210ENST00000474330 PKMYT1Q99640 499 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 SLC4A5Q9BY07 1137 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 DUSP16Q9BY84 665 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 B3GNT5Q9BYG0 378 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 MIS12Q9H081 205 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 ABCB6Q9NP58 842 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 INSL6Q9Y581 213 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 NLRC5Q86WI3 1866 aa21.5■■□□□ 1.03
CDHR3-210ENST00000474330 ENC1O14682 589 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 ATP1A1P05023 1023 aaKnown RBP21.49■■□□□ 1.03
CDHR3-210ENST00000474330 FGFR3P22607 806 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 PBX3P40426 434 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 MRPL58Q14197 206 aaKnown RBP21.49■■□□□ 1.03
CDHR3-210ENST00000474330 ZNF268Q14587 947 aaPredicted RBP21.49■■□□□ 1.03
CDHR3-210ENST00000474330 CCDC142Q17RM4 750 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 FAM171A1Q5VUB5 890 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 PMF1Q6P1K2 205 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 PHLDB2Q86SQ0 1253 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 DAAM2Q86T65 1068 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 C3orf20Q8ND61 904 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 OR10T2Q8NGX3 314 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 PCED1BQ96HM7 432 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 SYNCQ9H7C4 482 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 CERS4Q9HA82 394 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 TJP2Q9UDY2 1190 aa21.49■■□□□ 1.03
CDHR3-210ENST00000474330 CARNS1A5YM72 827 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 EPOPA6NHQ4 379 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 URI1O94763 535 aaPredicted RBP21.48■■□□□ 1.03
CDHR3-210ENST00000474330 EFEMP2O95967 443 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 ERBB2P04626 1255 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 RPL34P49207 117 aaKnown RBP21.48■■□□□ 1.03
CDHR3-210ENST00000474330 TSPY1Q01534 308 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 MAPRE1Q15691 268 aaKnown RBP21.48■■□□□ 1.03
CDHR3-210ENST00000474330 VARS2Q5ST30 1063 aaKnown RBP21.48■■□□□ 1.03
CDHR3-210ENST00000474330 SPOUT1Q5T280 376 aaKnown RBP21.48■■□□□ 1.03
CDHR3-210ENST00000474330 CYP4A22Q5TCH4 519 aa21.48■■□□□ 1.03
CDHR3-210ENST00000474330 MEI1Q5TIA1 1274 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms