RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 CCDC192P0DO97 292 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 PSMC2P35998 433 aaKnown RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 PSMC1P62191 440 aaKnown RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 CLDN10P78369 228 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 CYP4F8P98187 520 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 PLCB2Q00722 1185 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 DPCR1Q3MIW9 517 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 STXBP5Q5T5C0 1151 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 ANKRD40Q6AI12 368 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 POTEHQ6S545 545 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 INTS8Q75QN2 995 aaKnown RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 CELF5Q8N6W0 485 aaKnown RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 CCDC150Q8NCX0 1101 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 TAF4BQ92750 862 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 MSANTD3Q96H12 275 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 PKMYT1Q99640 499 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 DDX23Q9BUQ8 820 aaKnown RBP19.86■□□□□ 0.77
CCDC171-206ENST00000474193 LTB4R2Q9NPC1 389 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 RWDD2AQ9UIY3 292 aa19.86■□□□□ 0.77
CCDC171-206ENST00000474193 ATP8B3O60423 1300 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 SLC38A8A6NNN8 435 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 TRIM66O15016 1216 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 ATP2C2O75185 946 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 F11P03951 625 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 C4BPAP04003 597 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 HMGA1P17096 107 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 PTPN1P18031 435 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 VAMP7P51809 220 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 KPNA1P52294 538 aaPredicted RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 STX17P56962 302 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 ZCWPW2Q504Y3 356 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 TDRD10Q5VZ19 366 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 FAM186BQ8IYM0 893 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 CMTM8Q8IZV2 173 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 MAB21L3Q8N8X9 362 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 BPIFB1Q8TDL5 484 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 MYLPFQ96A32 169 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 TRMT2BQ96GJ1 504 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 TNIP3Q96KP6 325 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 MRPL45Q9BRJ2 306 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 NAT10Q9H0A0 1025 aaKnown RBP19.85■□□□□ 0.77
CCDC171-206ENST00000474193 VRTNQ9H8Y1 702 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 IL21Q9HBE4 155 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 FAM86C1Q9NVL1 165 aa19.85■□□□□ 0.77
CCDC171-206ENST00000474193 SYCE3A1L190 88 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 TRIM49BA6NDI0 452 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 NOL4O94818 638 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 EPB41P11171 864 aaKnown RBP19.84■□□□□ 0.77
CCDC171-206ENST00000474193 CD72P21854 359 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 BDNFP23560 247 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 ERCC5P28715 1186 aaPredicted RBP19.84■□□□□ 0.77
CCDC171-206ENST00000474193 GPR15P49685 360 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 PDE6CP51160 858 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 MLLT6P55198 1093 aaPredicted RBP19.84■□□□□ 0.77
CCDC171-206ENST00000474193 TYRO3Q06418 890 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 FCHO2Q0JRZ9 810 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 MDH1BQ5I0G3 518 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 SDHAF4Q5VUM1 108 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 CC2D1AQ6P1N0 951 aaPredicted RBP19.84■□□□□ 0.77
CCDC171-206ENST00000474193 FOXR2Q6PJQ5 311 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 GPIHBP1Q8IV16 184 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 C1orf210Q8IVY1 113 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 FAM3CQ92520 227 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 SPATA17Q96L03 361 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 MYRFLQ96LU7 910 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 SLC46A2Q9BY10 475 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 C8orf33Q9H7E9 229 aaPredicted RBP19.84■□□□□ 0.77
CCDC171-206ENST00000474193 KIF9Q9HAQ2 790 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 CRTAC1Q9NQ79 661 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 PIAS3Q9Y6X2 628 aa19.84■□□□□ 0.77
CCDC171-206ENST00000474193 NRG2O14511 850 aaPredicted RBP19.83■□□□□ 0.77
CCDC171-206ENST00000474193 LAMTOR5O43504 91 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 HCRTO43612 131 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 STX10O60499 249 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 PMS1P54277 932 aaKnown RBP19.83■□□□□ 0.77
CCDC171-206ENST00000474193 ENPEPQ07075 957 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 ZSCAN23Q3MJ62 389 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 ZACNQ401N2 412 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 DENND5BQ6ZUT9 1274 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 SV2AQ7L0J3 742 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 MON1AQ86VX9 555 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 PLEKHO2Q8TD55 490 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 PCED1BQ96HM7 432 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 ELOVL4Q9GZR5 314 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 XYLT2Q9H1B5 865 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 TDP1Q9NUW8 608 aa19.83■□□□□ 0.77
CCDC171-206ENST00000474193 SPATA6Q9NWH7 488 aaPredicted RBP19.83■□□□□ 0.77
CCDC171-206ENST00000474193 NDRG2Q9UN36 371 aaKnown RBP19.83■□□□□ 0.77
CCDC171-206ENST00000474193 USP17L7P0C7H9 530 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 PIK3CAP42336 1068 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 PPP3CCP48454 512 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 DLG4P78352 724 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 TTI2Q6NXR4 508 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 ZC3H14Q6PJT7 736 aaKnown RBP19.82■□□□□ 0.76
CCDC171-206ENST00000474193 B3GALNT2Q8NCR0 500 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 CEP63Q96MT8 703 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 MED10Q9BTT4 135 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 MKNK1Q9BUB5 465 aa19.82■□□□□ 0.76
CCDC171-206ENST00000474193 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
CCDC171-206ENST00000474193 TRPM5Q9NZQ8 1165 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms