RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MARSP56192 900 aaKnown RBP20.15■□□□□ 0.82
PTCD3-210ENST00000473829 GPC5P78333 572 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 GPR158Q5T848 1215 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 BMP8AQ7Z5Y6 402 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 FAM35AQ86V20 835 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 UNC93AQ86WB7 457 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 CCDC150Q8NCX0 1101 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 SMARCD2Q92925 531 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 ELSPBP1Q96BH3 223 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 RSPRY1Q96DX4 576 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 TNIP3Q96KP6 325 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 ELOVL4Q9GZR5 314 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 CYP3A43Q9HB55 503 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 COL4A2P08572 1712 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 PATJQ8NI35 1801 aa20.15■□□□□ 0.82
PTCD3-210ENST00000473829 CILPO75339 1184 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 USP46P62068 366 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 IER5LQ5T953 404 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 GPIHBP1Q8IV16 184 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 FUKQ8N0W3 1084 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 CRYBG2Q8N1P7 616 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 C12orf29Q8N999 325 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 PBXIP1Q96AQ6 731 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 TRMT2BQ96GJ1 504 aaKnown RBP20.14■□□□□ 0.81
PTCD3-210ENST00000473829 SPATA17Q96L03 361 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 C8orf48Q96LL4 319 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 MYRFLQ96LU7 910 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 TRPV4Q9HBA0 871 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 SLC2A4RGQ9NR83 387 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 FAM49BQ9NUQ9 324 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 RAPGEFL1Q9UHV5 662 aa20.14■□□□□ 0.81
PTCD3-210ENST00000473829 ZNF318Q5VUA4 2279 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 GOLGA6L22H0YM25 854 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 TRIM66O15016 1216 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 GRM2Q14416 872 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 VITQ6UXI7 678 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 IRF2BP1Q8IU81 584 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 GCNAQ96QF7 691 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 GPR88Q9GZN0 384 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 ZFP14Q9HCL3 533 aa20.13■□□□□ 0.81
PTCD3-210ENST00000473829 MYH10P35580 1976 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 KIF26AQ9ULI4 1882 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-210ENST00000473829 KRBA1A5PL33 1030 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 PRAMEF12O95522 483 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 GNA14O95837 355 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 ANXA13P27216 316 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 LRMPQ12912 555 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 ARHGAP15Q53QZ3 475 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 WDR44Q5JSH3 913 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 RBM43Q6ZSC3 357 aaKnown RBP20.12■□□□□ 0.81
PTCD3-210ENST00000473829 ARID3BQ8IVW6 561 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-210ENST00000473829 SIX5Q8N196 739 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 LMO3Q8TAP4 145 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 SLC2A14Q8TDB8 520 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 FAXDC2Q96IV6 333 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 CNOT6LQ96LI5 555 aaKnown RBP20.12■□□□□ 0.81
PTCD3-210ENST00000473829 KCNK16Q96T55 309 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 MED10Q9BTT4 135 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 NT5C1AQ9BXI3 368 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 SLC46A2Q9BY10 475 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 SMG9Q9H0W8 520 aaKnown RBP20.12■□□□□ 0.81
PTCD3-210ENST00000473829 TASP1Q9H6P5 420 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 KRT82Q9NSB4 513 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 CISHQ9NSE2 258 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 FBXL21Q9UKT6 434 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 CA14Q9ULX7 337 aa20.12■□□□□ 0.81
PTCD3-210ENST00000473829 WDFY4Q6ZS81 3184 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 ZDBF2Q9HCK1 2354 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 PMM2O15305 246 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 BEST1O76090 585 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 KCNH2Q12809 1159 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 ZNF394Q53GI3 561 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 TXNDC8Q6A555 127 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 DENND5BQ6ZUT9 1274 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 FBXL6Q8N531 539 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 ZMIZ2Q8NF64 920 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 SMARCD1Q96GM5 515 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 LRRC3BQ96PB8 259 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 SMOQ99835 787 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 TTLL2Q9BWV7 592 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 UXTQ9UBK9 157 aaPredicted RBP20.11■□□□□ 0.81
PTCD3-210ENST00000473829 WNT16Q9UBV4 365 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 TICRRQ7Z2Z1 1910 aa20.11■□□□□ 0.81
PTCD3-210ENST00000473829 ATP8B3O60423 1300 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 HEPACAM2A8MVW5 462 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 AP1G2O75843 785 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 CCDC192P0DO97 292 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 NPR3P17342 541 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 ADORA2BP29275 332 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 VCPP55072 806 aaKnown RBP20.1■□□□□ 0.81
PTCD3-210ENST00000473829 CUL2Q13617 745 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 CWF19L1Q69YN2 538 aaKnown RBP20.1■□□□□ 0.81
PTCD3-210ENST00000473829 UBR7Q8N806 425 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 MAB21L3Q8N8X9 362 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 CEP295NLQ96MC4 621 aa20.1■□□□□ 0.81
PTCD3-210ENST00000473829 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.1■□□□□ 0.81
PTCD3-210ENST00000473829 HELZP42694 1942 aaKnown RBP20.1■□□□□ 0.81
PTCD3-210ENST00000473829 MYO16Q9Y6X6 1858 aa20.09■□□□□ 0.81
PTCD3-210ENST00000473829 TNFRSF10BO14763 440 aa20.09■□□□□ 0.81
PTCD3-210ENST00000473829 FGFR1OPO95684 399 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms