RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 XYLT2Q9H1B5 865 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 ATXN3LQ9H3M9 355 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 SEMA4AQ9H3S1 761 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 TMLHEQ9NVH6 421 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 NXF1Q9UBU9 619 aaKnown RBP19.29■□□□□ 0.68
SNX4-204ENST00000473417 ARMCX3Q9UH62 379 aaPredicted RBP19.29■□□□□ 0.68
SNX4-204ENST00000473417 RWDD2AQ9UIY3 292 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 MRPS17Q9Y2R5 130 aaKnown RBP19.29■□□□□ 0.68
SNX4-204ENST00000473417 PCDHB5Q9Y5E4 795 aa19.29■□□□□ 0.68
SNX4-204ENST00000473417 HLA-DRAP01903 254 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 PIK3CAP42336 1068 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 RPS9P46781 194 aaKnown RBP19.28■□□□□ 0.68
SNX4-204ENST00000473417 TNNC1P63316 161 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 FZD5Q13467 585 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 CCDC183Q5T5S1 534 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 GPR158Q5T848 1215 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 RBM43Q6ZSC3 357 aaKnown RBP19.28■□□□□ 0.68
SNX4-204ENST00000473417 OSTM1Q86WC4 334 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 ARID3BQ8IVW6 561 aaPredicted RBP19.28■□□□□ 0.68
SNX4-204ENST00000473417 ZNF687Q8N1G0 1237 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 MED15Q96RN5 788 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 PKMYT1Q99640 499 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 ACBD6Q9BR61 282 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 METTL14Q9HCE5 456 aaKnown RBP19.28■□□□□ 0.68
SNX4-204ENST00000473417 TMEM8AQ9HCN3 771 aa19.28■□□□□ 0.68
SNX4-204ENST00000473417 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNX4-204ENST00000473417 DDX43Q9NXZ2 648 aaKnown RBP19.28■□□□□ 0.68
SNX4-204ENST00000473417 DMXL1Q9Y485 3027 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 MAN2B1O00754 1011 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 ZNF263O14978 683 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 NCAM2O15394 837 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 HCRTO43612 131 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 STX10O60499 249 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 STAU1O95793 577 aaKnown RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 ACAT1P24752 427 aaKnown RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 WEE1P30291 646 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 CDC25CP30307 473 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 GTF2H1P32780 548 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 MCCD1P59942 119 aaPredicted RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 CYP4F8P98187 520 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 MYL7Q01449 175 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 NFE2Q16621 373 aaPredicted RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 SGSM1Q2NKQ1 1148 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 ARHGAP15Q53QZ3 475 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 INTS6LQ5JSJ4 861 aaKnown RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 KRT39Q6A163 491 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 DPH6Q7L8W6 267 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 TAS1R2Q8TE23 839 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 GIPC2Q8TF65 315 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 PI4K2AQ9BTU6 479 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 SPATA6Q9NWH7 488 aaPredicted RBP19.27■□□□□ 0.68
SNX4-204ENST00000473417 OBP2AQ9NY56 170 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 TMEM63CQ9P1W3 806 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 DACH1Q9UI36 760 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 FBXO4Q9UKT5 387 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 PIAS3Q9Y6X2 628 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 R4GN57 208 aa19.27■□□□□ 0.68
SNX4-204ENST00000473417 GABRDO14764 452 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 CHADO15335 359 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 LAMTOR5O43504 91 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 LHX1P48742 406 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 MXI1P50539 228 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 ZNF667Q5HYK9 610 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 ZC3H14Q6PJT7 736 aaKnown RBP19.26■□□□□ 0.67
SNX4-204ENST00000473417 LIMS2Q7Z4I7 341 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 YAF2Q8IY57 180 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 KBTBD7Q8WVZ9 684 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 GCNAQ96QF7 691 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 MRPL45Q9BRJ2 306 aaKnown RBP19.26■□□□□ 0.67
SNX4-204ENST00000473417 TASP1Q9H6P5 420 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 VRTNQ9H8Y1 702 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
SNX4-204ENST00000473417 PRAMEF12O95522 483 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 GNA14O95837 355 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 HMGA1P17096 107 aaKnown RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 MLLT6P55198 1093 aaPredicted RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 TAF12Q16514 161 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 ZNF528Q3MIS6 628 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 CBWD6Q4V339 395 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 CBWD3Q5JTY5 395 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 CBWD5Q5RIA9 395 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 SPOPLQ6IQ16 392 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 CAVIN1Q6NZI2 390 aaKnown RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 SCARA5Q6ZMJ2 495 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 TMEM150AQ86TG1 271 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 CREBRFQ8IUR6 639 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 SLC35C1Q96A29 364 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 MSANTD3Q96H12 275 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 LRRC3BQ96PB8 259 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 NDRG2Q9UN36 371 aaKnown RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 EP300Q09472 2414 aaPredicted RBP19.25■□□□□ 0.67
SNX4-204ENST00000473417 OTOGLQ3ZCN5 2332 aa19.25■□□□□ 0.67
SNX4-204ENST00000473417 ASS1P00966 412 aaKnown RBP19.24■□□□□ 0.67
SNX4-204ENST00000473417 PDGFRBP09619 1106 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 WARSP23381 471 aaKnown RBP19.24■□□□□ 0.67
SNX4-204ENST00000473417 LMO2P25791 158 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 PCSK1P29120 753 aa19.24■□□□□ 0.67
SNX4-204ENST00000473417 GNL1P36915 607 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms