RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 ATP11CQ8NB49 1132 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 EPC1Q9H2F5 836 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 AGO3Q9H9G7 860 aaKnown RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 CDC23Q9UJX2 597 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 CCNL1Q9UK58 526 aaPredicted RBP6.7□□□□□ -1.34
CKS1B-204ENST00000471245 PCDHGB2Q9Y5G2 931 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 ARFGEF1Q9Y6D6 1849 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 TTC21AQ8NDW8 1320 aa6.7□□□□□ -1.34
CKS1B-204ENST00000471245 SBF1O95248 1867 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 TNRC6CQ9HCJ0 1690 aaKnown RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 CCDC189A1A4V9 331 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 CHEK2O96017 543 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 POMCP01189 267 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 ANXA2P07355 339 aaKnown RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 FGFR2P21802 821 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 RPS19P39019 145 aaKnown RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 HSPA7P48741 367 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 MAPK10P53779 464 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 MXRA7P84157 204 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 SURF1Q15526 300 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 SLC35G1Q2M3R5 365 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 FAM214AQ32MH5 1076 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 ARL13BQ3SXY8 428 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 ANKS6Q68DC2 871 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 FAM111BQ6SJ93 734 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 GPRIN1Q7Z2K8 1008 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 UBE3BQ7Z3V4 1068 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 LGI4Q8N135 537 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 ZFP28Q8NHY6 868 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 SCAMP4Q969E2 229 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 IQCDQ96DY2 449 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 SNX22Q96L94 193 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 ZNF512Q96ME7 567 aaPredicted RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 DPYSL5Q9BPU6 564 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 TTLL2Q9BWV7 592 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 SIK2Q9H0K1 926 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 C12orf65Q9H3J6 166 aaKnown RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 PARD6AQ9NPB6 346 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 FBXO34Q9NWN3 711 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 CLCA2Q9UQC9 943 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 PLEKHM1Q9Y4G2 1056 aa6.69□□□□□ -1.34
CKS1B-204ENST00000471245 MORC2Q9Y6X9 1032 aaPredicted RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 MAP2P11137 1827 aaKnown RBP6.69□□□□□ -1.34
CKS1B-204ENST00000471245 A0A087WWL8 130 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 hCG_1642624A0A1W2PR95 340 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 CLCA1A8K7I4 914 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 THAP12O43422 761 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 PIP5K1CO60331 668 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 CDC14BO60729 498 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 DNAJB5O75953 348 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 STC2O76061 302 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 FGAP02671 866 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 HARSP12081 509 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 BMP7P18075 431 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 KLRC1P26715 233 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 GRK6P43250 576 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 EPHB4P54760 987 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 RAP2BP61225 183 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 ICA1Q05084 483 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 TRIM14Q14142 442 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 UBXN2BQ14CS0 331 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 MPEG1Q2M385 716 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 TUBB8Q3ZCM7 444 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 FBLN7Q53RD9 439 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 METTL24Q5JXM2 366 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 FKBP15Q5T1M5 1219 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 KLHDC7AQ5VTJ3 777 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 ARHGEF18Q6ZSZ5 1173 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 BEND5Q7L4P6 421 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 FAM83AQ86UY5 434 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 SYTL1Q8IYJ3 562 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 ATXN2LQ8WWM7 1075 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 EIF2AQ9BY44 585 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 KTN1Q86UP2 1357 aaKnown RBP6.68□□□□□ -1.34
CKS1B-204ENST00000471245 USP47Q96K76 1375 aa6.68□□□□□ -1.34
CKS1B-204ENST00000471245 ZNF785A8K8V0 405 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 PLA2G6O60733 806 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 UNC5CO95185 931 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 MT-ND5P03915 603 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 EEF1GP26641 437 aaKnown RBP6.67□□□□□ -1.34
CKS1B-204ENST00000471245 PHKA1P46020 1223 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 PPP2CBP62714 309 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 PPP2CAP67775 309 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 TCF15Q12870 199 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 CTBP1Q13363 440 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 STARD3Q14849 445 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 ZFYVE27Q5T4F4 411 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 ATXN7L2Q5T6C5 722 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-204ENST00000471245 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 PGBD2Q6P3X8 592 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 TLDC1Q6P9B6 456 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 DRICH1Q6PGQ1 229 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-204ENST00000471245 CATSPERGQ6ZRH7 1159 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 SDR16C5Q8N3Y7 309 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 TFAP2CQ92754 450 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 LMF1Q96S06 567 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms