RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 TMCO5BA8MYB1 307 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 VNN2O95498 520 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 OR1D2P34982 312 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 GPD2P43304 727 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 NDUFV1P49821 464 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 CACNA2D1P54289 1103 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 CENPCQ03188 943 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 BST2Q10589 180 aaKnown RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 GPR17Q13304 367 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 CAMK1Q14012 370 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 NFE2Q16621 373 aaPredicted RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 HS1BP3Q53T59 392 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 ALKBH5Q6P6C2 394 aaKnown RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 DNAAF5Q86Y56 855 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 SPATA2LQ8IUW3 424 aaPredicted RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 WDTC1Q8N5D0 677 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 ANKRD52Q8NB46 1076 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 TMEM35BQ8NCS4 154 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 FUBP3Q96I24 572 aaKnown RBP eCLIP12.54□□□□□ -0.4
RNF13-208ENST00000467996 RXFP1Q9HBX9 757 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 TMEM30AQ9NV96 361 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 ABI2Q9NYB9 513 aaPredicted RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 CYTH4Q9UIA0 394 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 COLQQ9Y215 455 aaPredicted RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 REXO2Q9Y3B8 237 aaKnown RBP12.54□□□□□ -0.4
RNF13-208ENST00000467996 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 IRAK3Q9Y616 596 aa12.54□□□□□ -0.4
RNF13-208ENST00000467996 C2orf71A6NGG8 1288 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 TULP2O00295 520 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 TEX28O15482 410 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 AP1G2O75843 785 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 BEST1O76090 585 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 IPO7O95373 1038 aaKnown RBP12.53□□□□□ -0.4
RNF13-208ENST00000467996 CXCL14O95715 111 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 CNPP09543 421 aaKnown RBP12.53□□□□□ -0.4
RNF13-208ENST00000467996 SETSIPP0DME0 302 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 GZMAP12544 262 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 NPR3P17342 541 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 BDNFP23560 247 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 IRS1P35568 1242 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 NSFP46459 744 aaKnown RBP12.53□□□□□ -0.4
RNF13-208ENST00000467996 PDE4CQ08493 712 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 SMARCB1Q12824 385 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 SPA17Q15506 151 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 LRIT3Q3SXY7 679 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 CFAP221Q4G0U5 840 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 CCDC122Q5T0U0 273 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ACAD10Q6JQN1 1059 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 CLEC20AQ6ZU45 233 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 TTC9BQ8N6N2 239 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ZMIZ2Q8NF64 920 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 SPPL2BQ8TCT7 592 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 C2orf15Q8WU43 125 aaKnown RBP12.53□□□□□ -0.4
RNF13-208ENST00000467996 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 SMOQ99835 787 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ISCUQ9H1K1 167 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ABCB6Q9NP58 842 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 PCDHB5Q9Y5E4 795 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
RNF13-208ENST00000467996 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.4
RNF13-208ENST00000467996 CHD9Q3L8U1 2897 aa12.52□□□□□ -0.4
RNF13-208ENST00000467996 HIDE1A8MVS5 230 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 RTN2O75298 545 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 CYP2F1P24903 491 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 PLA2G4AP47712 749 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 MAP3K7CLP57077 242 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 ADCY1Q08828 1119 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 PDCLQ13371 301 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 RAB33AQ14088 237 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 PTPN20Q4JDL3 420 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 MON1BQ7L1V2 547 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 PHF13Q86YI8 300 aaPredicted RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 MRPL43Q8N983 215 aaKnown RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 ATAD1Q8NBU5 361 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 KLHL5Q96PQ7 755 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 CPXM1Q96SM3 734 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 C11orf70Q9BRQ4 267 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 EMILIN2Q9BXX0 1053 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 NGRNQ9NPE2 291 aaKnown RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 AFF4Q9UHB7 1163 aaKnown RBP12.52□□□□□ -0.41
RNF13-208ENST00000467996 PCDHA13Q9Y5I0 950 aa12.52□□□□□ -0.41
RNF13-208ENST00000467996 LPXNO60711 386 aa12.51□□□□□ -0.41
RNF13-208ENST00000467996 ABLIM3O94929 683 aa12.51□□□□□ -0.41
RNF13-208ENST00000467996 FTLP02792 175 aaPredicted RBP12.51□□□□□ -0.41
RNF13-208ENST00000467996 ADH1AP07327 375 aa12.51□□□□□ -0.41
RNF13-208ENST00000467996 CCDC175P0C221 793 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms