RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 RLIMQ9NVW2 624 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 CFAP97Q9P2B7 532 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 CDYLQ9Y232 598 aa4.94□□□□□ -1.62
SMC4-208ENST00000467468 COL4A3Q01955 1670 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 CLCA1A8K7I4 914 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 M0R3H8 397 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 BTN3A1O00481 513 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 VEGFAP15692 232 aaPredicted RBP4.93□□□□□ -1.62
SMC4-208ENST00000467468 SLC6A4P31645 630 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 VAV2P52735 878 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 EXOSC9Q06265 439 aaKnown RBP4.93□□□□□ -1.62
SMC4-208ENST00000467468 SLFN5Q08AF3 891 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 GALNT1Q10472 559 aaPredicted RBP4.93□□□□□ -1.62
SMC4-208ENST00000467468 MPP3Q13368 585 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
SMC4-208ENST00000467468 KIF22Q14807 665 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 CYP2A13Q16696 494 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 ZACNQ401N2 412 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 LVRNQ6Q4G3 990 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 CATSPERGQ6ZRH7 1159 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 BEND5Q7L4P6 421 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 CLNKQ7Z7G1 428 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 MICU3Q86XE3 530 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 PDSS2Q86YH6 399 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 TXLNBQ8N3L3 684 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 TRAPPC12Q8WVT3 735 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 TNPO1Q92973 898 aaKnown RBP4.93□□□□□ -1.62
SMC4-208ENST00000467468 SNX22Q96L94 193 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 AGAP2Q99490 1192 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 ZNF518BQ9C0D4 1074 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 SIK2Q9H0K1 926 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 BRD9Q9H8M2 597 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 C11orf21Q9P2W6 132 aa4.93□□□□□ -1.62
SMC4-208ENST00000467468 TRGV11A0A075B6L2 103 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 A0A1W2PS29 197 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 SYT5O00445 386 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 HNRNPDLO14979 420 aaKnown RBP4.92□□□□□ -1.62
SMC4-208ENST00000467468 THAP12O43422 761 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 TBC1D4O60343 1298 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 PPFIA2O75334 1257 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 CHEK2O96017 543 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 MT-ND5P03915 603 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 SBK3P0C264 359 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 KCNJ5P48544 419 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 FOXO1Q12778 655 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 SLC13A2Q13183 592 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 PREPLQ4J6C6 727 aaPredicted RBP4.92□□□□□ -1.62
SMC4-208ENST00000467468 SLC44A4Q53GD3 710 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 CCDC93Q567U6 631 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 PCSK4Q6UW60 755 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.92□□□□□ -1.62
SMC4-208ENST00000467468 PCGF5Q86SE9 256 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 TICAM2Q86XR7 235 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 ANKRD18AQ8IVF6 992 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 IL17REQ8NFR9 667 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 CYP2W1Q8TAV3 490 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 TBC1D20Q96BZ9 403 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 TM7SF3Q9NS93 570 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.92□□□□□ -1.62
SMC4-208ENST00000467468 SYBUQ9NX95 663 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 HSFX1Q9UBD0 423 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 GJD2Q9UKL4 321 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 SLC39A10Q9ULF5 831 aa4.92□□□□□ -1.62
SMC4-208ENST00000467468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMC4-208ENST00000467468 KAT6AQ92794 2004 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 PRAMEF33A0A0G2JMD5 474 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 CCDC195A0A1B0GUA6 201 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 MBD3L4A6NDZ8 208 aaPredicted RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 MBD3L3A6NE82 208 aaPredicted RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 PRRT4C9JH25 899 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 AREL1O15033 823 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 NPC1O15118 1278 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 PRAMEF10O60809 474 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 ESRRBO95718 433 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 LMNAP02545 664 aaKnown RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 KCNA2P16389 499 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 KLRC1P26715 233 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 SEC24CP53992 1094 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 RPS7P62081 194 aaKnown RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 LMOD3Q0VAK6 560 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 RAB32Q13637 225 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 PFKFB4Q16877 469 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 GEN1Q17RS7 908 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 JAKMIP3Q5VZ66 844 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 SLC44A3Q8N4M1 653 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 SLC17A8Q8NDX2 589 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 SCAMP4Q969E2 229 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 ZG16BQ96DA0 208 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 C18orf8Q96DM3 657 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 PTCD3Q96EY7 689 aaKnown RBP4.91□□□□□ -1.62
SMC4-208ENST00000467468 Q96MF0 132 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 KLHL32Q96NJ5 620 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 SMOQ99835 787 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 GDF15Q99988 308 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 TLR10Q9BXR5 811 aa4.91□□□□□ -1.62
SMC4-208ENST00000467468 IMPG2Q9BZV3 1241 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms