RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DUSP16Q9BY84 665 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 DNAI2Q9GZS0 605 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 TMEM30AQ9NV96 361 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 HESX1Q9UBX0 185 aa13.74□□□□□ -0.21
COL4A1-202ENST00000467182 ZBBXA8MT70 800 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 E5RJQ4 531 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 ENC1O14682 589 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 NCK2O43639 380 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 CAPN15O75808 1086 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 BEST1O76090 585 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 PLA2G4AP47712 749 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 RGS7P49802 495 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 NAP1L1P55209 391 aaKnown RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 ELAVL2Q12926 359 aaKnown RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 ZNF268Q14587 947 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 IFI16Q16666 785 aaKnown RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 C11orf63Q6NUN7 778 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 KCNT2Q6UVM3 1135 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 CLEC20AQ6ZU45 233 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 NT5DC3Q86UY8 548 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 CPNE8Q86YQ8 564 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
COL4A1-202ENST00000467182 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 BTBD6Q96KE9 485 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 ALS2CR12Q96Q35 445 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 SMOQ99835 787 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 JRKLQ9Y4A0 524 aa13.73□□□□□ -0.21
COL4A1-202ENST00000467182 CTAGE9A4FU28 777 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 TMEM191CA6NGB0 347 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 HHLA1C9JL84 531 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 XPO1O14980 1071 aaKnown RBP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 FTCDO95954 541 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 NPR3P17342 541 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 LAG3P18627 525 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 CDR1P51861 262 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 RSPO2Q6UXX9 243 aaPredicted RBP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 FEZF2Q8TBJ5 459 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 KHSRPQ92945 711 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 PIWIL1Q96J94 861 aaKnown RBP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 ZNF558Q96NG5 402 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 YME1L1Q96TA2 773 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 RHOBTB2Q9BYZ6 727 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 L2HGDHQ9H9P8 463 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 CSNK1G1Q9HCP0 422 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 CYLDQ9NQC7 956 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 CHST7Q9NS84 486 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 PARVAQ9NVD7 372 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 STRIP2Q9ULQ0 834 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
COL4A1-202ENST00000467182 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
COL4A1-202ENST00000467182 SIGLEC16A6NMB1 481 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PIK3R2O00459 728 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PAPSS1O43252 624 aaPredicted RBP13.71□□□□□ -0.21
COL4A1-202ENST00000467182 AP1G2O75843 785 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 VNN2O95498 520 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 FAM200BP0CF97 657 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 RABGGTBP53611 331 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 RPL7AP62424 266 aaKnown RBP13.71□□□□□ -0.21
COL4A1-202ENST00000467182 TSPY1Q01534 308 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 OGDHQ02218 1023 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 DNAJC24Q6P3W2 148 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 OLFML1Q6UWY5 402 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 DAAM2Q86T65 1068 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PIGZQ86VD9 579 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 CEP57Q86XR8 500 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PHOSPHO2Q8TCD6 241 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 KCTD13Q8WZ19 329 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 CD101Q93033 1021 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 HSFY1Q96LI6 401 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 MED10Q9BTT4 135 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 UBXN6Q9BZV1 441 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.21
COL4A1-202ENST00000467182 KRT82Q9NSB4 513 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 ANAPC7Q9UJX3 599 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PACSIN2Q9UNF0 486 aaPredicted RBP13.71□□□□□ -0.21
COL4A1-202ENST00000467182 ALG6Q9Y672 507 aa13.71□□□□□ -0.21
COL4A1-202ENST00000467182 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 OR6C75A6NL08 312 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 DDX3YO15523 660 aaKnown RBP13.7□□□□□ -0.22
COL4A1-202ENST00000467182 SOD2P04179 222 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 MAP3K7CLP57077 242 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 MESDQ14696 234 aa13.7□□□□□ -0.22
COL4A1-202ENST00000467182 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms