RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ENPEPQ07075 957 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 CEP350Q5VT06 3117 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 RBP3P10745 1247 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 KRT4P19013 534 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 KDELR1P24390 212 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 WDR4P57081 412 aaKnown RBP17.16■□□□□ 0.34
SLX4-202ENST00000466154 SURF1Q15526 300 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 SMAD1Q15797 465 aaKnown RBP17.16■□□□□ 0.34
SLX4-202ENST00000466154 NOL9Q5SY16 702 aaKnown RBP17.16■□□□□ 0.34
SLX4-202ENST00000466154 UBR7Q8N806 425 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 KLHL29Q96CT2 875 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 MIS12Q9H081 205 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 SMARCAD1Q9H4L7 1026 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 RBPJLQ9UBG7 517 aa17.16■□□□□ 0.34
SLX4-202ENST00000466154 MBTD1Q05BQ5 628 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 RNASEH2BQ5TBB1 312 aaKnown RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 TSHZ1Q6ZSZ6 1077 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 C7orf31Q8N865 590 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 FBXO36Q8NEA4 188 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 CCHCR1Q8TD31 782 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 HPDLQ96IR7 371 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 ABLIM1O14639 778 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 KRT7P08729 469 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 RPL22P35268 128 aaKnown RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 OASLQ15646 514 aaKnown RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 PPP6R3Q5H9R7 873 aaPredicted RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 CDCA2Q69YH5 1023 aaPredicted RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 PPP1R21Q6ZMI0 780 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 SLC4A11Q8NBS3 891 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 XPO7Q9UIA9 1087 aaKnown RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 USP18Q9UMW8 372 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 SIGLEC16A6NMB1 481 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 SOCS7O14512 581 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 AVILO75366 819 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 PDGFRAP16234 1089 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 GLRA4Q5JXX5 417 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 PPP1R2P3Q6NXS1 205 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 XYLT1Q86Y38 959 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 FITM2Q8N6M3 262 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 TMEM176AQ96HP8 235 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 ZNF518BQ9C0D4 1074 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 FAM49AQ9H0Q0 323 aaPredicted RBP17.15■□□□□ 0.34
SLX4-202ENST00000466154 ARL2BPQ9Y2Y0 163 aa17.15■□□□□ 0.34
SLX4-202ENST00000466154 EVPLQ92817 2033 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 TCRBV5S1A1TA0A578 114 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
SLX4-202ENST00000466154 MCF2LO15068 1137 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 GCAP28676 217 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 NDST1P52848 882 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 YWHAGP61981 247 aaKnown RBP eCLIP17.14■□□□□ 0.33
SLX4-202ENST00000466154 SLC25A11Q02978 314 aaKnown RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 KRT81Q14533 505 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 MORF4L2Q15014 288 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 LACTB2Q53H82 288 aaPredicted RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 SUGP1Q8IWZ8 645 aaKnown RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 PRCCQ92733 491 aaPredicted RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 LPIN3Q9BQK8 851 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 E5RJQ4 531 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 CNMDO75829 334 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 TAC1P20366 129 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 ARL4CP56559 192 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 ELF3P78545 371 aaPredicted RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 TTLL4Q14679 1199 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
SLX4-202ENST00000466154 TRABD2AQ86V40 505 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 LRRC8CQ8TDW0 803 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 AFG1LQ8WV93 481 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 OPTNQ96CV9 577 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 KIF12Q96FN5 646 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 CCDC134Q9H6E4 229 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 PCDH9Q9HC56 1237 aa17.14■□□□□ 0.33
SLX4-202ENST00000466154 HBP1O60381 514 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 PHKA2P46019 1235 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 TAP1Q03518 808 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 OVGP1Q12889 678 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 SLC1A5Q15758 541 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 PPP1R15BQ5SWA1 713 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 ZNF449Q6P9G9 518 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 VSIG1Q86XK7 387 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 CPT1BQ92523 772 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 MAML1Q92585 1016 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 MAGEB18Q96M61 343 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 FZD8Q9H461 694 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 RNF181Q9P0P0 153 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 HES2Q9Y543 173 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 KAT6AQ92794 2004 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 A8MUI8 341 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 LVRNQ6Q4G3 990 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 SESTD1Q86VW0 696 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 CTAGE3PQ8IX95 158 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 CFAP36Q96G28 342 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 FGD4Q96M96 766 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 TTC25Q96NG3 672 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 ERAP1Q9NZ08 941 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 DCTN4Q9UJW0 460 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 PCDHGC3Q9UN70 934 aa17.13■□□□□ 0.33
SLX4-202ENST00000466154 B4GALT4O60513 344 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms