RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 C8orf48Q96LL4 319 aa27.56■■■□□ 2
SMC4-206ENST00000465903 ASB16Q96NS5 453 aa27.56■■■□□ 2
SMC4-206ENST00000465903 PLA2G2FQ9BZM2 168 aa27.56■■■□□ 2
SMC4-206ENST00000465903 DACH1Q9UI36 760 aa27.56■■■□□ 2
SMC4-206ENST00000465903 MAGED2Q9UNF1 606 aaPredicted RBP27.56■■■□□ 2
SMC4-206ENST00000465903 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.56■■■□□ 2
SMC4-206ENST00000465903 TMEM31Q5JXX7 168 aa27.55■■■□□ 2
SMC4-206ENST00000465903 FUKQ8N0W3 1084 aa27.55■■■□□ 2
SMC4-206ENST00000465903 C12orf29Q8N999 325 aa27.55■■■□□ 2
SMC4-206ENST00000465903 TRMT2BQ96GJ1 504 aaKnown RBP27.55■■■□□ 2
SMC4-206ENST00000465903 KXD1Q9BQD3 176 aa27.55■■■□□ 2
SMC4-206ENST00000465903 LRFN3Q9BTN0 628 aa27.55■■■□□ 2
SMC4-206ENST00000465903 NT5C1AQ9BXI3 368 aa27.55■■■□□ 2
SMC4-206ENST00000465903 GPR88Q9GZN0 384 aa27.55■■■□□ 2
SMC4-206ENST00000465903 F8VP50 259 aa27.54■■■□□ 2
SMC4-206ENST00000465903 TRIM66O15016 1216 aa27.54■■■□□ 2
SMC4-206ENST00000465903 AFPP02771 609 aaKnown RBP27.54■■■□□ 2
SMC4-206ENST00000465903 CDC25CP30307 473 aa27.54■■■□□ 2
SMC4-206ENST00000465903 CYP4F8P98187 520 aa27.54■■■□□ 2
SMC4-206ENST00000465903 LRMPQ12912 555 aa27.54■■■□□ 2
SMC4-206ENST00000465903 CT47A1Q5JQC4 288 aaPredicted RBP27.54■■■□□ 2
SMC4-206ENST00000465903 FAM35AQ86V20 835 aa27.54■■■□□ 2
SMC4-206ENST00000465903 CEP295NLQ96MC4 621 aa27.54■■■□□ 2
SMC4-206ENST00000465903 THAP9Q9H5L6 903 aa27.54■■■□□ 2
SMC4-206ENST00000465903 CISHQ9NSE2 258 aa27.54■■■□□ 2
SMC4-206ENST00000465903 TMEM63CQ9P1W3 806 aa27.54■■■□□ 2
SMC4-206ENST00000465903 TMEM221A6NGB7 291 aa27.53■■■□□ 2
SMC4-206ENST00000465903 M0R296 226 aa27.53■■■□□ 2
SMC4-206ENST00000465903 ECI2O75521 394 aa27.53■■■□□ 2
SMC4-206ENST00000465903 CCDC130P13994 396 aa27.53■■■□□ 2
SMC4-206ENST00000465903 CUL2Q13617 745 aa27.53■■■□□ 2
SMC4-206ENST00000465903 CCDC183Q5T5S1 534 aa27.53■■■□□ 2
SMC4-206ENST00000465903 GPR158Q5T848 1215 aa27.53■■■□□ 2
SMC4-206ENST00000465903 CREBRFQ8IUR6 639 aa27.53■■■□□ 2
SMC4-206ENST00000465903 EHBP1Q8NDI1 1231 aa27.53■■■□□ 2
SMC4-206ENST00000465903 ZSCAN18Q8TBC5 510 aaPredicted RBP27.53■■■□□ 2
SMC4-206ENST00000465903 SMARCD2Q92925 531 aa27.53■■■□□ 2
SMC4-206ENST00000465903 ELSPBP1Q96BH3 223 aa27.53■■■□□ 2
SMC4-206ENST00000465903 KCNK16Q96T55 309 aa27.53■■■□□ 2
SMC4-206ENST00000465903 MED10Q9BTT4 135 aa27.53■■■□□ 2
SMC4-206ENST00000465903 TADA3O75528 432 aa27.52■■■□□ 2
SMC4-206ENST00000465903 ANXA13P27216 316 aa27.52■■■□□ 2
SMC4-206ENST00000465903 USP46P62068 366 aa27.52■■■□□ 2
SMC4-206ENST00000465903 ZNF394Q53GI3 561 aa27.52■■■□□ 2
SMC4-206ENST00000465903 UBR7Q8N806 425 aa27.52■■■□□ 2
SMC4-206ENST00000465903 SLC2A14Q8TDB8 520 aa27.52■■■□□ 2
SMC4-206ENST00000465903 HNRNPABQ99729 332 aaKnown RBP27.52■■■□□ 2
SMC4-206ENST00000465903 TASP1Q9H6P5 420 aa27.52■■■□□ 2
SMC4-206ENST00000465903 TRPV4Q9HBA0 871 aa27.52■■■□□ 2
SMC4-206ENST00000465903 ZFP14Q9HCL3 533 aa27.52■■■□□ 2
SMC4-206ENST00000465903 FAM49BQ9NUQ9 324 aa27.52■■■□□ 2
SMC4-206ENST00000465903 PATJQ8NI35 1801 aa27.52■■■□□ 2
SMC4-206ENST00000465903 NCANO14594 1321 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SRFP11831 508 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 TPD52L1Q16890 204 aaPredicted RBP27.51■■□□□ 1.99
SMC4-206ENST00000465903 DENND5BQ6ZUT9 1274 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 TTC39CQ8N584 583 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SLC4A11Q8NBS3 891 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 ZMIZ2Q8NF64 920 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 CYFIP2Q96F07 1278 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SMARCD1Q96GM5 515 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SMOQ99835 787 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SLC46A2Q9BY10 475 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 SLITRK6Q9H5Y7 841 aa27.51■■□□□ 1.99
SMC4-206ENST00000465903 FAM124BQ9H5Z6 455 aaPredicted RBP27.51■■□□□ 1.99
SMC4-206ENST00000465903 UXTQ9UBK9 157 aaPredicted RBP27.51■■□□□ 1.99
SMC4-206ENST00000465903 ATP8B3O60423 1300 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 PRR33A8MZF0 331 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 BEST1O76090 585 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 VIPR2P41587 438 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 RAD23BP54727 409 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 GPC5P78333 572 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 CETN1Q12798 172 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 ARHGAP15Q53QZ3 475 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 BMP8AQ7Z5Y6 402 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 GPIHBP1Q8IV16 184 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 ARID3BQ8IVW6 561 aaPredicted RBP27.5■■□□□ 1.99
SMC4-206ENST00000465903 RSPRY1Q96DX4 576 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 NT5C1BQ96P26 610 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 TTLL2Q9BWV7 592 aa27.5■■□□□ 1.99
SMC4-206ENST00000465903 WEE1P30291 646 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 SASS6Q6UVJ0 657 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 VITQ6UXI7 678 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 HFE2Q6ZVN8 426 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 ENOX1Q8TC92 643 aaKnown RBP27.49■■□□□ 1.99
SMC4-206ENST00000465903 KAT5Q92993 513 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 TMEM176AQ96HP8 235 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 GCNAQ96QF7 691 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 CSNK1G1Q9HCP0 422 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 SLC2A4RGQ9NR83 387 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 KRT82Q9NSB4 513 aa27.49■■□□□ 1.99
SMC4-206ENST00000465903 SAMSN1Q9NSI8 373 aaKnown RBP27.49■■□□□ 1.99
SMC4-206ENST00000465903 TNFRSF10BO14763 440 aa27.48■■□□□ 1.99
SMC4-206ENST00000465903 AP1G2O75843 785 aa27.48■■□□□ 1.99
SMC4-206ENST00000465903 CFHP08603 1231 aa27.48■■□□□ 1.99
SMC4-206ENST00000465903 TBXAS1P24557 533 aaPredicted RBP27.48■■□□□ 1.99
SMC4-206ENST00000465903 ADORA2BP29275 332 aa27.48■■□□□ 1.99
SMC4-206ENST00000465903 PPP1R26Q5T8A7 1209 aaPredicted RBP27.48■■□□□ 1.99
SMC4-206ENST00000465903 TXNDC8Q6A555 127 aa27.48■■□□□ 1.99
SMC4-206ENST00000465903 ARHGEF19Q8IW93 802 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms