RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SIGLEC14Q08ET2 396 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 LRMPQ12912 555 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 NCAPHQ15003 741 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 STXBP5Q5T5C0 1151 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 TANGO2Q6ICL3 276 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 UNC93AQ86WB7 457 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 TRIM59Q8IWR1 403 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 TWNKQ96RR1 684 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 LRFN3Q9BTN0 628 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 ANP32EQ9BTT0 268 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 MED10Q9BTT4 135 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 SAMSN1Q9NSI8 373 aaKnown RBP18.12■□□□□ 0.49
VPS52-215ENST00000464425 COQ4Q9Y3A0 265 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 TECTAO75443 2155 aa18.12■□□□□ 0.49
VPS52-215ENST00000464425 FGF19O95750 216 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 EEF1GP26641 437 aaKnown RBP18.11■□□□□ 0.49
VPS52-215ENST00000464425 ANXA13P27216 316 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 CACNA2D1P54289 1103 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 CYP4F8P98187 520 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 INCA1Q0VD86 236 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 IQCB1Q15051 598 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 GPR158Q5T848 1215 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 CDKAL1Q5VV42 579 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 DHX40Q8IX18 779 aaKnown RBP18.11■□□□□ 0.49
VPS52-215ENST00000464425 CRYBG2Q8N1P7 616 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 C12orf29Q8N999 325 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 ZSCAN18Q8TBC5 510 aaPredicted RBP18.11■□□□□ 0.49
VPS52-215ENST00000464425 WHAMMQ8TF30 809 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 CNOT6LQ96LI5 555 aaKnown RBP18.11■□□□□ 0.49
VPS52-215ENST00000464425 ASB16Q96NS5 453 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 GCNAQ96QF7 691 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 ARID3AQ99856 593 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 PLA2G2FQ9BZM2 168 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 ELOVL4Q9GZR5 314 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 TMEM30AQ9NV96 361 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 FANCLQ9NW38 375 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 DUSP12Q9UNI6 340 aa18.11■□□□□ 0.49
VPS52-215ENST00000464425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.11■□□□□ 0.49
VPS52-215ENST00000464425 F8VP50 259 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 PMM2O15305 246 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 NOL4O94818 638 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 CCDC130P13994 396 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 CDC25CP30307 473 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 VIPR2P41587 438 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 KCNH2Q12809 1159 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 ZNF394Q53GI3 561 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 ARHGAP15Q53QZ3 475 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 TCP11X2Q5H9J9 407 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 PAQR9Q6ZVX9 377 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 TMEM150AQ86TG1 271 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 AOPEPQ8N6M6 819 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 SMARCD2Q92925 531 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 ASIC4Q96FT7 647 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 SPATA17Q96L03 361 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 NT5C1AQ9BXI3 368 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 TSPY26PQ9H489 355 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 ZFP14Q9HCL3 533 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 FAM49BQ9NUQ9 324 aa18.1■□□□□ 0.49
VPS52-215ENST00000464425 ATP8B3O60423 1300 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 KCNJ18B7U540 433 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 TRIM66O15016 1216 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 CILPO75339 1184 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 AFPP02771 609 aaKnown RBP18.09■□□□□ 0.49
VPS52-215ENST00000464425 F11P03951 625 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 CFHP08603 1231 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 PRKCSHP14314 528 aaPredicted RBP18.09■□□□□ 0.49
VPS52-215ENST00000464425 ZNF18P17022 549 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 FCARP24071 287 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 CETN1Q12798 172 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 KCNJ12Q14500 433 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 HFE2Q6ZVN8 426 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 FAM35AQ86V20 835 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 FUKQ8N0W3 1084 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 SLC2A14Q8TDB8 520 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 PBXIP1Q96AQ6 731 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 C8orf48Q96LL4 319 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 KCNK16Q96T55 309 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 HSD3B7Q9H2F3 369 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 TASP1Q9H6P5 420 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 CBX8Q9HC52 389 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 CISHQ9NSE2 258 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 FBXL21Q9UKT6 434 aa18.09■□□□□ 0.49
VPS52-215ENST00000464425 LRRC10BA6NIK2 292 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 BECN2A8MW95 431 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 PRR33A8MZF0 331 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 P4HA2O15460 535 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 ECI2O75521 394 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 SRFP11831 508 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 TRIM21P19474 475 aaKnown RBP18.08■□□□□ 0.48
VPS52-215ENST00000464425 ADORA2BP29275 332 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 USP46P62068 366 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 GPC5P78333 572 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 CUL2Q13617 745 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 HSP90AA4PQ58FG1 418 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 DENND5BQ6ZUT9 1274 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 ARID3BQ8IVW6 561 aaPredicted RBP18.08■□□□□ 0.48
VPS52-215ENST00000464425 ELSPBP1Q96BH3 223 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 FAXDC2Q96IV6 333 aa18.08■□□□□ 0.48
VPS52-215ENST00000464425 MYRFLQ96LU7 910 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms