RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 BRI3BPQ8WY22 251 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 LZICQ8WZA0 190 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 P2RX7Q99572 595 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CDC42EP4Q9H3Q1 356 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 RAVER2Q9HCJ3 691 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 OSGEPQ9NPF4 335 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF214Q9UL59 606 aaPredicted RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 CCPG1Q9ULG6 757 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 RABL2BQ9UNT1 228 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF232Q9UNY5 417 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 MRPL11Q9Y3B7 192 aaKnown RBP9.14□□□□□ -0.95
SHQ1-203ENST00000463369 DGKBQ9Y6T7 804 aa9.14□□□□□ -0.95
SHQ1-203ENST00000463369 MCM3APO60318 1980 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 BTBD19C9JJ37 291 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 MEIS2O14770 477 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 CAPN9O14815 690 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 HNRNPCL1O60812 293 aaKnown RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 CBX6O95503 412 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 ECEL1O95672 775 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 LYNP07948 512 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 SLC10A3P09131 477 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 CTNNA2P26232 953 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 SH3BGRP55822 239 aaPredicted RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM132BQ14DG7 1078 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 LETM2Q2VYF4 491 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 LIN52Q52LA3 116 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 TTC27Q6P3X3 843 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 RFWD3Q6PCD5 774 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 FAM47EQ6ZV65 393 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF365Q70YC5 407 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 CCDC25Q86WR0 208 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 REXO1Q8N1G1 1221 aaKnown RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 U2AF1L4Q8WU68 220 aaKnown RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 SH3KBP1Q96B97 665 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 IWS1Q96ST2 819 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 MIS12Q9H081 205 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 SAR1AQ9NR31 198 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 ABT1Q9ULW3 272 aaKnown RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 PHTF1Q9UMS5 762 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
SHQ1-203ENST00000463369 NCANO14594 1321 aa9.13□□□□□ -0.95
SHQ1-203ENST00000463369 GTPBP10A4D1E9 387 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 MANSC4A6NHS7 340 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 FAM155AB1AL88 458 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TBX10O75333 385 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ATP6V1G1O75348 118 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ACSL3O95573 720 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TAL1P17542 331 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 PON1P27169 355 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF132P52740 706 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 INHBCP55103 352 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 WDR72Q3MJ13 1102 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CCDC137Q6PK04 289 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 DSTYKQ6XUX3 929 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TRIM50Q86XT4 487 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CYP4X1Q8N118 509 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 SLC30A5Q8TAD4 765 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 RFFLQ8WZ73 363 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ALG3Q92685 438 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 RAD54LQ92698 747 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF184Q99676 751 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 MIPEPQ99797 713 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 PTPN18Q99952 460 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 DDX50Q9BQ39 737 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 YIPF4Q9BSR8 244 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CADM1Q9BY67 442 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 STX18Q9P2W9 335 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ZNF212Q9UDV6 495 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CIDEBQ9UHD4 219 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TBC1D30Q9Y2I9 924 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ADGRA3Q8IWK6 1321 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ANKRD63C9JTQ0 380 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 PDHXO00330 501 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 PDPK1O15530 556 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 KRT36O76013 467 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 GFPT2O94808 682 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 PSMG1O95456 288 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TMEM253P0C7T8 217 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 UBTFL6P0CB48 400 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CCDC166P0CW27 439 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 DESP17661 470 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 WDR4P57081 412 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 JAM2P57087 298 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 SNX16P57768 344 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 RTP1P59025 263 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 USP46P62068 366 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CDR2Q01850 454 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 GHRHRQ02643 423 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 COASYQ13057 564 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 TAF1BQ53T94 588 aaPredicted RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ACSBG2Q5FVE4 666 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 C1orf228Q6PIY5 440 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 C1orf122Q6ZSJ8 110 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 KRT25Q7Z3Z0 450 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 ZC3H3Q8IXZ2 948 aaKnown RBP9.12□□□□□ -0.95
SHQ1-203ENST00000463369 CLEC4DQ8WXI8 215 aa9.12□□□□□ -0.95
SHQ1-203ENST00000463369 DNAJC19Q96DA6 116 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms