RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 MAGEA11P43364 429 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 EDRF1Q3B7T1 1238 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 DCAF17Q5H9S7 520 aaPredicted RBP19.16■□□□□ 0.66
LINC00960-201ENST00000463183 TCERG1LQ5VWI1 586 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 ALYREFQ86V81 257 aaKnown RBP19.16■□□□□ 0.66
LINC00960-201ENST00000463183 CSGALNACT1Q8TDX6 532 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 TAS1R2Q8TE23 839 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 DNASE1L2Q92874 299 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 E2F7Q96AV8 911 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 LRRC3BQ96PB8 259 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 VRTNQ9H8Y1 702 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 CHMP5Q9NZZ3 219 aa19.16■□□□□ 0.66
LINC00960-201ENST00000463183 NDRG2Q9UN36 371 aaKnown RBP19.16■□□□□ 0.66
LINC00960-201ENST00000463183 MAPK13O15264 365 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 NUBP1P53384 320 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 PMS1P54277 932 aaKnown RBP19.15■□□□□ 0.66
LINC00960-201ENST00000463183 CACNA2D1P54289 1103 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 ANKRD40Q6AI12 368 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 KLHL10Q6JEL2 608 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 VSTM1Q6UX27 236 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 ACOT1Q86TX2 421 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 CMTM8Q8IZV2 173 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 B3GNT5Q9BYG0 378 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 LTB4R2Q9NPC1 389 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 HMGXB4Q9UGU5 601 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 MAN1B1Q9UKM7 699 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 PIAS3Q9Y6X2 628 aa19.15■□□□□ 0.66
LINC00960-201ENST00000463183 F5P12259 2224 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 PIEZO1Q92508 2521 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 TRIM66O15016 1216 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 TADA3O75528 432 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ABL1P00519 1130 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ASS1P00966 412 aaKnown RBP19.14■□□□□ 0.65
LINC00960-201ENST00000463183 GLULP15104 373 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 CD58P19256 250 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 TARSP26639 723 aaKnown RBP19.14■□□□□ 0.65
LINC00960-201ENST00000463183 SOX9P48436 509 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 KPNA1P52294 538 aaPredicted RBP19.14■□□□□ 0.65
LINC00960-201ENST00000463183 NDST1P52848 882 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 USP46P62068 366 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 NOP14P78316 857 aaKnown RBP19.14■□□□□ 0.65
LINC00960-201ENST00000463183 STIM1Q13586 685 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ANGPT1Q15389 498 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ZNF852Q6ZMS4 543 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 DENND5BQ6ZUT9 1274 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ADSSL1Q8N142 457 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 CCDC150Q8NCX0 1101 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 BPIFB1Q8TDL5 484 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 ELOVL4Q9GZR5 314 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 CCL26Q9Y258 94 aa19.14■□□□□ 0.65
LINC00960-201ENST00000463183 CKMP06732 381 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 FAM163BP0C2L3 166 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 ASPAP45381 313 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 MXI1P50539 228 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 MON1AQ86VX9 555 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 CELF5Q8N6W0 485 aaKnown RBP19.13■□□□□ 0.65
LINC00960-201ENST00000463183 SPATA20Q8TB22 786 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 TAF4BQ92750 862 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 TRMT2BQ96GJ1 504 aaKnown RBP19.13■□□□□ 0.65
LINC00960-201ENST00000463183 TNIP3Q96KP6 325 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 CYP2S1Q96SQ9 504 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 BCO2Q9BYV7 579 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 APOBEC3GQ9HC16 384 aaKnown RBP19.13■□□□□ 0.65
LINC00960-201ENST00000463183 TMEM8AQ9HCN3 771 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 FAM49BQ9NUQ9 324 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 GTSE1Q9NYZ3 720 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 TICRRQ7Z2Z1 1910 aa19.13■□□□□ 0.65
LINC00960-201ENST00000463183 ATP8B3O60423 1300 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 PSMA7O14818 248 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 CHADO15335 359 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 CCDC130P13994 396 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 DDX6P26196 483 aaKnown RBP eCLIP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 TNK2Q07912 1038 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 FCHO2Q0JRZ9 810 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 KRT39Q6A163 491 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 FAM35AQ86V20 835 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 FAM3CQ92520 227 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 USP13Q92995 863 aaPredicted RBP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 SPATA17Q96L03 361 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 MYRFLQ96LU7 910 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 DDX23Q9BUQ8 820 aaKnown RBP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 IRF2BPLQ9H1B7 796 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
LINC00960-201ENST00000463183 SPATA6Q9NWH7 488 aaPredicted RBP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 THG1LQ9NWX6 298 aaKnown RBP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 MRPS17Q9Y2R5 130 aaKnown RBP19.12■□□□□ 0.65
LINC00960-201ENST00000463183 TRAV19A0A0A6YYK7 116 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
LINC00960-201ENST00000463183 CCNE1P24864 410 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 ADORA2BP29275 332 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 MRE11P49959 708 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 FKBP3Q00688 224 aaKnown RBP19.11■□□□□ 0.65
LINC00960-201ENST00000463183 CAMK4Q16566 473 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 ARHGAP29Q52LW3 1261 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 ARL14EPQ8N8R7 260 aaPredicted RBP19.11■□□□□ 0.65
LINC00960-201ENST00000463183 C8orf48Q96LL4 319 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 SLC22A12Q96S37 553 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 KCNK16Q96T55 309 aa19.11■□□□□ 0.65
LINC00960-201ENST00000463183 NIF3L1Q9GZT8 377 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms