RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ACP6Q9NPH0 428 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 NLRC4Q9NPP4 1024 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 TMEM30AQ9NV96 361 aa21.51■■□□□ 1.03
NUP43-205ENST00000463048 A0A1B0GTH6 734 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 F8VP50 259 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 MYL4P12829 197 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 UCHL3P15374 230 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 BRD2P25440 801 aaKnown RBP21.5■■□□□ 1.03
NUP43-205ENST00000463048 ANXA13P27216 316 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 MTHFRP42898 656 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 RPL10AP62906 217 aaKnown RBP21.5■■□□□ 1.03
NUP43-205ENST00000463048 DRAP1Q14919 205 aaPredicted RBP21.5■■□□□ 1.03
NUP43-205ENST00000463048 VEPH1Q14D04 833 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 GOLGA7BQ2TAP0 167 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 SGO2Q562F6 1265 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 KCNK16Q96T55 309 aa21.5■■□□□ 1.03
NUP43-205ENST00000463048 PTPRDP23468 1912 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 FOXN3O00409 490 aaPredicted RBP21.49■■□□□ 1.03
NUP43-205ENST00000463048 BEST1O76090 585 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 NOL4O94818 638 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 PTPN2P17706 415 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 MAGEA11P43364 429 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 MAP3K7CLP57077 242 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 PABPC1LQ4VXU2 614 aaKnown RBP21.49■■□□□ 1.03
NUP43-205ENST00000463048 RTL10Q7L3V2 364 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 GET4Q7L5D6 327 aaPredicted RBP21.49■■□□□ 1.03
NUP43-205ENST00000463048 DNAJB7Q7Z6W7 309 aaPredicted RBP21.49■■□□□ 1.03
NUP43-205ENST00000463048 ATXN2LQ8WWM7 1075 aaKnown RBP21.49■■□□□ 1.03
NUP43-205ENST00000463048 ING5Q8WYH8 240 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 TFAP2BQ92481 460 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 SUSD6Q92537 303 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 SMARCD1Q96GM5 515 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 FAM81BQ96LP2 452 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 ASB2Q96Q27 587 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 ERGIC2Q96RQ1 377 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 PLCB1Q9NQ66 1216 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 HSFX1Q9UBD0 423 aa21.49■■□□□ 1.03
NUP43-205ENST00000463048 DOCK6Q96HP0 2047 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 SLC38A8A6NNN8 435 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 CYP26A1O43174 497 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 RHOP08100 348 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 FAM200BP0CF97 657 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 GJA1P17302 382 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 NR1I3Q14994 352 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 VSTM1Q6UX27 236 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 SHC3Q92529 594 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 RPGRIP1Q96KN7 1286 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 HNRNPABQ99729 332 aaKnown RBP21.48■■□□□ 1.03
NUP43-205ENST00000463048 SMOQ99835 787 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 FAM124BQ9H5Z6 455 aaPredicted RBP21.48■■□□□ 1.03
NUP43-205ENST00000463048 ZNF334Q9HCZ1 680 aaPredicted RBP21.48■■□□□ 1.03
NUP43-205ENST00000463048 MYH10P35580 1976 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 CLUHO75153 1309 aa21.48■■□□□ 1.03
NUP43-205ENST00000463048 SPTBN5Q9NRC6 3674 aaKnown RBP21.48■■□□□ 1.03
NUP43-205ENST00000463048 TCF20Q9UGU0 1960 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 TRIM66O15016 1216 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 PAEPP09466 180 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 VDRP11473 427 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 FSHRP23945 695 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 ZNF132P52740 706 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 SMAD2Q15796 467 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 PUS10Q3MIT2 529 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 ITIH5Q86UX2 942 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 ITFG1Q8TB96 612 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 UBA3Q8TBC4 463 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 PSMG2Q969U7 264 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 TCEAL4Q96EI5 215 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 ZSWIM1Q9BR11 485 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 NAA15Q9BXJ9 866 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 XPO4Q9C0E2 1151 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 GPR88Q9GZN0 384 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 WDR6Q9NNW5 1121 aaKnown RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 DMAP1Q9NPF5 467 aaPredicted RBP21.47■■□□□ 1.03
NUP43-205ENST00000463048 ASAH2Q9NR71 780 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 TSPAN16Q9UKR8 245 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 FAM50BQ9Y247 325 aa21.47■■□□□ 1.03
NUP43-205ENST00000463048 NRG2O14511 850 aaPredicted RBP21.46■■□□□ 1.03
NUP43-205ENST00000463048 THAP12O43422 761 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 GNA15P30679 374 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 SLC5A9Q2M3M2 681 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 CYP4A22Q5TCH4 519 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 CLEC20AQ6ZU45 233 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 PDZD4Q76G19 769 aaPredicted RBP21.46■■□□□ 1.03
NUP43-205ENST00000463048 ST13P5Q8NFI4 369 aaPredicted RBP21.46■■□□□ 1.03
NUP43-205ENST00000463048 NECTIN4Q96NY8 510 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 STK33Q9BYT3 514 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 CNTN6Q9UQ52 1028 aa21.46■■□□□ 1.03
NUP43-205ENST00000463048 MRPS23Q9Y3D9 190 aaKnown RBP21.46■■□□□ 1.03
NUP43-205ENST00000463048 FAM170AA1A519 330 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 O00370 1275 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 GBP2P32456 591 aaPredicted RBP21.45■■□□□ 1.02
NUP43-205ENST00000463048 CCR2P41597 374 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 USP46P62068 366 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 ARHGAP17Q68EM7 881 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 CYP26C1Q6V0L0 522 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 CACNA2D4Q7Z3S7 1137 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 TTC30AQ86WT1 665 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 ZMIZ2Q8NF64 920 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 C8orf48Q96LL4 319 aa21.45■■□□□ 1.02
NUP43-205ENST00000463048 SPAG5Q96R06 1193 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms