RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 TTC39AQ5SRH9 613 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 ZBTB41Q5SVQ8 909 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 RSPO2Q6UXX9 243 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 TMC5Q6UXY8 1006 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CHST3Q7LGC8 479 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 FAM160B2Q86V87 743 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 GLCCI1Q86VQ1 547 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 ULK2Q8IYT8 1036 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 PPTC7Q8NI37 304 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 ZNF483Q8TF39 744 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 CHURC1Q8WUH1 139 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 STAMQ92783 540 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CLDN23Q96B33 292 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 NEIL1Q96FI4 390 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 LRIG1Q96JA1 1093 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 NELL2Q99435 816 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 PCGF6Q9BYE7 350 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 GBP3Q9H0R5 595 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 CCDC8Q9H0W5 538 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 CLMPQ9H6B4 373 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 PIH1D3Q9NQM4 214 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 EPS15L1Q9UBC2 864 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 SYNPO2Q9UMS6 1093 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 HDAC5Q9UQL6 1122 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 DSPP15924 2871 aaKnown RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 FRMPD2Q68DX3 1309 aaPredicted RBP3.34□□□□□ -1.87
CD46-210ENST00000462968 RALGAPA2Q2PPJ7 1873 aa3.34□□□□□ -1.87
CD46-210ENST00000462968 FREM2Q5SZK8 3169 aa3.34□□□□□ -1.88
CD46-210ENST00000462968 COL4A3Q01955 1670 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CEP295Q9C0D2 2601 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 PTPDC1A2A3K4 754 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CAPN8A6NHC0 703 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 TMEM232C9JQI7 657 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 PLA2G6O60733 806 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 N4BP1O75113 896 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 TADA3O75528 432 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 PPM1BO75688 479 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 C1QL1O75973 258 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CHRNA1P02708 482 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 EPHX1P07099 455 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 UBTFL1P0CB47 393 aaPredicted RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 ZNF286BP0CG31 522 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CYP2D6P10635 497 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 TDGF1P13385 188 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 LAG3P18627 525 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 MAKP20794 623 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CALML3P27482 149 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 PPM1AP35813 382 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 EXOSC9Q06265 439 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 LPIN1Q14693 890 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 SF3A2Q15428 464 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 C12orf60Q5U649 245 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 DAB2IPQ5VWQ8 1189 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 HEATR6Q6AI08 1181 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 C15orf39Q6ZRI6 1047 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 C16orf86Q6ZW13 317 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 POLNQ7Z5Q5 900 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 RTN4RL1Q86UN2 441 aaPredicted RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 AMOTL1Q8IY63 956 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 ZNF513Q8N8E2 541 aaPredicted RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 COLGALT1Q8NBJ5 622 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 TMEM87AQ8NBN3 555 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 LSM14AQ8ND56 463 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 GMCL1P1Q8NEA9 526 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 SPATA18Q8TC71 538 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 STAG1Q8WVM7 1258 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 HNRNPLLQ8WVV9 542 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 GLG1Q92896 1179 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 MKL1Q969V6 931 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 MYADMQ96S97 322 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 FTHL17Q9BXU8 183 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 RNPEPQ9H4A4 650 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 ZNF703Q9H7S9 590 aaPredicted RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 SFXN1Q9H9B4 322 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 MRS2Q9HD23 443 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 LTB4R2Q9NPC1 389 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 GPRC5CQ9NQ84 441 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 TYW1Q9NV66 732 aaKnown RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 CLIP2Q9UDT6 1046 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 CCPG1Q9ULG6 757 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 MTF2Q9Y483 593 aaPredicted RBP3.33□□□□□ -1.88
CD46-210ENST00000462968 FANCIQ9NVI1 1328 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 ITPR1Q14643 2758 aa3.33□□□□□ -1.88
CD46-210ENST00000462968 SCN10AQ9Y5Y9 1956 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 LAMA5O15230 3695 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 FAM221BA6H8Z2 402 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 TBKBP1A7MCY6 615 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 ANHXE9PGG2 379 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 H0Y626 953 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 HGSO14964 777 aaPredicted RBP3.32□□□□□ -1.88
CD46-210ENST00000462968 RAMP2O60895 175 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 TRIM16O95361 564 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 CXCL14O95715 111 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 ICAM1P05362 532 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 SMIM10L2AP0DMW4 78 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 SMIM10L2BP0DMW5 78 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 SCG2P13521 617 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 EPCAMP16422 314 aa3.32□□□□□ -1.88
CD46-210ENST00000462968 CSRP1P21291 193 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms