RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CACNA2D1P54289 1103 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 ORC1Q13415 861 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 CRYBG2Q8N1P7 616 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 FAXDC2Q96IV6 333 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 C8orf48Q96LL4 319 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 MFSD1Q9H3U5 465 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 TASP1Q9H6P5 420 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 RWDD2AQ9UIY3 292 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 CA14Q9ULX7 337 aa20.05■□□□□ 0.8
COL9A3-203ENST00000462700 NCANO14594 1321 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 KRBA1A5PL33 1030 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 F8VP50 259 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 TADA3O75528 432 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 WDR44Q5JSH3 913 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 VITQ6UXI7 678 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 PAQR9Q6ZVX9 377 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 FAM35AQ86V20 835 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 MLKLQ8NB16 471 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 TWNKQ96RR1 684 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
COL9A3-203ENST00000462700 TMEM30AQ9NV96 361 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 RAPGEFL1Q9UHV5 662 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 HCN4Q9Y3Q4 1203 aa20.04■□□□□ 0.8
COL9A3-203ENST00000462700 ATP8B3O60423 1300 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 CILPO75339 1184 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 GNA14O95837 355 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 CD58P19256 250 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 DDX6P26196 483 aaKnown RBP eCLIP20.03■□□□□ 0.8
COL9A3-203ENST00000462700 WEE1P30291 646 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 FMO5P49326 533 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 MARSP56192 900 aaKnown RBP20.03■□□□□ 0.8
COL9A3-203ENST00000462700 GRM2Q14416 872 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 DENND5BQ6ZUT9 1274 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 ARID3BQ8IVW6 561 aaPredicted RBP20.03■□□□□ 0.8
COL9A3-203ENST00000462700 DEPDC1BQ8WUY9 529 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 MRPS31Q92665 395 aaKnown RBP20.03■□□□□ 0.8
COL9A3-203ENST00000462700 E2F7Q96AV8 911 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 RSPRY1Q96DX4 576 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 MED10Q9BTT4 135 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 SLC46A2Q9BY10 475 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 ARHGEF3Q9NR81 526 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 ZMYM5Q9UJ78 669 aa20.03■□□□□ 0.8
COL9A3-203ENST00000462700 HEPACAM2A8MVW5 462 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 GOLGA6L22H0YM25 854 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 PMM2O15305 246 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 FGFR1OPO95684 399 aaKnown RBP20.02■□□□□ 0.8
COL9A3-203ENST00000462700 CCDC130P13994 396 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 NPR3P17342 541 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 PSMC3P17980 439 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 TRIM21P19474 475 aaKnown RBP20.02■□□□□ 0.8
COL9A3-203ENST00000462700 VCPP55072 806 aaKnown RBP20.02■□□□□ 0.8
COL9A3-203ENST00000462700 USP46P62068 366 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 PFKPQ01813 784 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 CWF19L1Q69YN2 538 aaKnown RBP20.02■□□□□ 0.8
COL9A3-203ENST00000462700 MFSD6LQ8IWD5 586 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 TRIM59Q8IWR1 403 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 FUKQ8N0W3 1084 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 C12orf29Q8N999 325 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 GPT2Q8TD30 523 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 WHAMMQ8TF30 809 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 TATDN2Q93075 761 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 SMARCD1Q96GM5 515 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 MED15Q96RN5 788 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 TRMT61BQ9BVS5 477 aaKnown RBP20.02■□□□□ 0.8
COL9A3-203ENST00000462700 TTLL2Q9BWV7 592 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 NT5C1AQ9BXI3 368 aa20.02■□□□□ 0.8
COL9A3-203ENST00000462700 SOBPA7XYQ1 873 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 PRAMEF12O95522 483 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 IER5LQ5T953 404 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 TXNDC8Q6A555 127 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 GPIHBP1Q8IV16 184 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 CMTM8Q8IZV2 173 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 TTC39CQ8N584 583 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 MAB21L3Q8N8X9 362 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 FLCNQ8NFG4 579 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 SLC2A14Q8TDB8 520 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 ARID3AQ99856 593 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 DMAP1Q9NPF5 467 aaPredicted RBP20.01■□□□□ 0.79
COL9A3-203ENST00000462700 KRT82Q9NSB4 513 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 FAM49BQ9NUQ9 324 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 OBP2AQ9NY56 170 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 EHD2Q9NZN4 543 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 PTPRDP23468 1912 aa20.01■□□□□ 0.79
COL9A3-203ENST00000462700 AP1G2O75843 785 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 AVPR2P30518 371 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 GDI1P31150 447 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 DPCR1Q3MIW9 517 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 ASTLQ6HA08 431 aaPredicted RBP20■□□□□ 0.79
COL9A3-203ENST00000462700 MON1AQ86VX9 555 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 DNASE1L2Q92874 299 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 KCNK16Q96T55 309 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 FAM124BQ9H5Z6 455 aaPredicted RBP20■□□□□ 0.79
COL9A3-203ENST00000462700 BRD9Q9H8M2 597 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 CISHQ9NSE2 258 aa20■□□□□ 0.79
COL9A3-203ENST00000462700 DPYSL4O14531 572 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 P4HA2O15460 535 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 CCDC192P0DO97 292 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 AVPR1AP37288 418 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 CLCN5P51795 746 aa19.99■□□□□ 0.79
COL9A3-203ENST00000462700 FCHO2Q0JRZ9 810 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms