RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ERO1BQ86YB8 467 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 PHYKPLQ8IUZ5 450 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 TBCKQ8TEA7 893 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 CLMNQ96JQ2 1002 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 TMEM168Q9H0V1 697 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 MAGEL2Q9UJ55 1249 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 MCM8Q9UJA3 840 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 CDC42EP3Q9UKI2 254 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 CTDP1Q9Y5B0 961 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-204ENST00000462658 SRPRBQ9Y5M8 271 aaKnown RBP8.22□□□□□ -1.09
UBE4B-204ENST00000462658 MORC2Q9Y6X9 1032 aaPredicted RBP8.22□□□□□ -1.09
UBE4B-204ENST00000462658 ATAD5Q96QE3 1844 aa8.22□□□□□ -1.09
UBE4B-204ENST00000462658 DOCK1Q14185 1865 aa8.21□□□□□ -1.09
UBE4B-204ENST00000462658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 CXCL11O14625 94 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 MEIS2O14770 477 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 ICAM1P05362 532 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 CMA1P23946 247 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 APEX1P27695 318 aaKnown RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 MOGSQ13724 837 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 ZSCAN23Q3MJ62 389 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 CCDC183Q5T5S1 534 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 USP17L6PQ6QN14 398 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 UNQ6494/PRO21346Q6UXR6 183 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 CATSPERGQ6ZRH7 1159 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 CCDC73Q6ZRK6 1079 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 NEK8Q86SG6 692 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 FSIP1Q8NA03 581 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 FEZF2Q8TBJ5 459 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 MRPS27Q92552 414 aaKnown RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 ZDHHC5Q9C0B5 715 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 GOLPH3LQ9H4A5 285 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 DACT1Q9NYF0 836 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 FBXO2Q9UK22 296 aaPredicted RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 MRPL11Q9Y3B7 192 aaKnown RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 NOC2LQ9Y3T9 749 aaKnown RBP8.21□□□□□ -1.1
UBE4B-204ENST00000462658 ABCB11O95342 1321 aa8.21□□□□□ -1.1
UBE4B-204ENST00000462658 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 A0A1B0GVL5 298 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 VWA5AO00534 786 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 KDM1AO60341 852 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 CCNT1O60563 726 aaKnown RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 ULK1O75385 1050 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 LETM1O95202 739 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 FOSP01100 380 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 ATP2C1P98194 919 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 COG2Q14746 738 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 LETM2Q2VYF4 491 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 FAM26FQ5R3K3 315 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 NT5DC1Q5TFE4 455 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 RESP18Q5W5W9 173 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 IQSEC1Q6DN90 963 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 SHC4Q6S5L8 630 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 OTOP2Q7RTS6 562 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 CMIPQ8IY22 773 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 CPXCR1Q8N123 301 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 C4orf32Q8N8J7 132 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 ENGASEQ8NFI3 743 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 FERMT2Q96AC1 680 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 SLC38A10Q9HBR0 1119 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 RAVER2Q9HCJ3 691 aaKnown RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 TOPORSQ9NS56 1045 aaPredicted RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 DDX19AQ9NUU7 478 aaKnown RBP8.2□□□□□ -1.1
UBE4B-204ENST00000462658 HOXC10Q9NYD6 342 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 PNMA2Q9UL42 364 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 CCPG1Q9ULG6 757 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 MYH15Q9Y2K3 1946 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 OTOFQ9HC10 1997 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 ZNF536O15090 1300 aa8.2□□□□□ -1.1
UBE4B-204ENST00000462658 A0A0G2JLL6 359 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 GCOM1H8Y6P7 765 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 LAD1O00515 517 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 PRKD3O94806 890 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 CFBP00751 764 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 POLR2MP0CAP2 368 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 KCNQ1P51787 676 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 NDUFA8P51970 172 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 SESN3P58005 492 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 FKBP1BP68106 108 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ADCY2Q08462 1091 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 PPIL2Q13356 520 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ORC2Q13416 577 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ZBTB41Q5SVQ8 909 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ARL6IP4Q66PJ3 421 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 TIGD7Q6NT04 549 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 GADL1Q6ZQY3 521 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 CXXC5Q7LFL8 322 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 GPR155Q7Z3F1 870 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 PRRT2Q7Z6L0 340 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 SPATS2Q86XZ4 545 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 TBC1D5Q92609 795 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 OPTNQ96CV9 577 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 NAP1L4Q99733 375 aaKnown RBP8.19□□□□□ -1.1
UBE4B-204ENST00000462658 ANO3Q9BYT9 981 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 CSRNP2Q9H175 543 aa8.19□□□□□ -1.1
UBE4B-204ENST00000462658 NUP62CLQ9H1M0 184 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms