RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PARNO95453 639 aaKnown RBP15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 SETSIPP0DME0 302 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 TCF4P15884 667 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 CFAP221Q4G0U5 840 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 DCUN1D2Q6PH85 259 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 EMC1Q8N766 993 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 TRIM43Q96BQ3 446 aaPredicted RBP15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 PCDHA3Q9Y5H8 950 aa15.83■□□□□ 0.12
RPRD1B-203ENST00000462548 BEST1O76090 585 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 KRT3P12035 628 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 BST2Q10589 180 aaKnown RBP15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 TRNP1Q6NT89 227 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM110Q86TL2 294 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 ABI1Q8IZP0 508 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 ACTRT1Q8TDG2 376 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM209Q96SK2 561 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 RBM12Q9NTZ6 932 aaKnown RBP15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 WDR35Q9P2L0 1181 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 RNF14Q9UBS8 474 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 IP6K2Q9UHH9 426 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 F8VP50 259 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 PAFAH1B1P43034 410 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 RABGGTBP53611 331 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 BCAT1P54687 386 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 OR6B2Q6IFH4 312 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 NPAS4Q8IUM7 802 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 MSANTD4Q8NCY6 345 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 OR10T2Q8NGX3 314 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 STK32AQ8WU08 396 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 CARD9Q9H257 536 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM30AQ9NV96 361 aa15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
RPRD1B-203ENST00000462548 FNDC1Q4ZHG4 1894 aaPredicted RBP15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM189-UBE2V1I3L0A0 370 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 PAPSS1O43252 624 aaPredicted RBP15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 PYGMP11217 842 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 SLC1A1P43005 524 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 RPL34P49207 117 aaKnown RBP15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 TAF5Q15542 800 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 FAM102AQ5T9C2 384 aaPredicted RBP15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 UBL4BQ8N7F7 174 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 KHSRPQ92945 711 aaKnown RBP eCLIP15.81■□□□□ 0.127e-7■■■■□ 21.8
RPRD1B-203ENST00000462548 PCED1BQ96HM7 432 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 FAM193BQ96PV7 902 aaPredicted RBP15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM51Q9NW97 253 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 CDH9Q9ULB4 789 aa15.81■□□□□ 0.12
RPRD1B-203ENST00000462548 CCDC66A2RUB6 948 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 NRP1O14786 923 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 CACNA2D1P54289 1103 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 BCAR1P56945 870 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 TAP1Q03518 808 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 CNKSR3Q6P9H4 555 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 OLFML1Q6UWY5 402 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 SCUBE3Q8IX30 993 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 CLEC4CQ8WTT0 213 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 RNPC3Q96LT9 517 aaKnown RBP15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PKMYT1Q99640 499 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.121e-15■□□□□ 9
RPRD1B-203ENST00000462548 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 DUSP16Q9BY84 665 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 RHOBTB2Q9BYZ6 727 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 ANKZF1Q9H8Y5 726 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PRDM5Q9NQX1 630 aaPredicted RBP15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 TMLHEQ9NVH6 421 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PCDHB8Q9UN66 801 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 COL4A6Q14031 1691 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 TBKBP1A7MCY6 615 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 GRAP2O75791 330 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 UPP2O95045 317 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 RHOXF2BP0C7M4 288 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MAN1A1P33908 653 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PBX3P40426 434 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PLA2G4AP47712 749 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 SLC11A1P49279 550 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MRPS25P82663 173 aaKnown RBP15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 ITIH3Q06033 890 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 OVOS1Q6IE37 1185 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 CLEC20AQ6ZU45 233 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 LRRTM3Q86VH5 581 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 METTL23Q86XA0 190 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 ARFGAP1Q8N6T3 406 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 ANKRD7Q92527 254 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 RHOXF2Q9BQY4 288 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MED10Q9BTT4 135 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MIS12Q9H081 205 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 MARCH5Q9NX47 278 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 TMEM59LQ9UK28 342 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 NR2E1Q9Y466 385 aa15.8■□□□□ 0.12
RPRD1B-203ENST00000462548 PGRMC1O00264 195 aaKnown RBP15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 FGGP02679 453 aa15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 TYMPP19971 482 aa15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 PAX3P23760 479 aa15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 PLCB3Q01970 1234 aa15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 INTS6LQ5JSJ4 861 aaKnown RBP15.79■□□□□ 0.12
RPRD1B-203ENST00000462548 CC2D1AQ6P1N0 951 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms