RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CYP26C1Q6V0L0 522 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 HEXIM2Q96MH2 286 aaKnown RBP14.87□□□□□ -0.03
HDLBP-229ENST00000460826 RIPOR3Q96MK2 946 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 ERGIC2Q96RQ1 377 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 HNRNPABQ99729 332 aaKnown RBP14.87□□□□□ -0.03
HDLBP-229ENST00000460826 ZSWIM1Q9BR11 485 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 CORO1BQ9BR76 489 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 NAA15Q9BXJ9 866 aaKnown RBP14.87□□□□□ -0.03
HDLBP-229ENST00000460826 LRRC3Q9BY71 257 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 ZNF334Q9HCZ1 680 aaPredicted RBP14.87□□□□□ -0.03
HDLBP-229ENST00000460826 WDR6Q9NNW5 1121 aaKnown RBP14.87□□□□□ -0.03
HDLBP-229ENST00000460826 PLCB1Q9NQ66 1216 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 CNTN6Q9UQ52 1028 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 CLUHO75153 1309 aa14.87□□□□□ -0.03
HDLBP-229ENST00000460826 MYO16Q9Y6X6 1858 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 A0A0C4DFX4 3053 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 F8VP50 259 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 AP1G2O75843 785 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 BEST1O76090 585 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 PNMA6AP0CW24 399 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-229ENST00000460826 CD19P15391 556 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 PTPN2P17706 415 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 GRIK1P39086 918 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 TPM4P67936 248 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 PLD1Q13393 1074 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 SLC5A9Q2M3M2 681 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 VSTM1Q6UX27 236 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 ENOSF1Q7L5Y1 443 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 GAS2L3Q86XJ1 694 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 TMC8Q8IU68 726 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 TFAP2BQ92481 460 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 SHC3Q92529 594 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 PSMG2Q969U7 264 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 TCEAL4Q96EI5 215 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 CYFIP2Q96F07 1278 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 ZNF512Q96ME7 567 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-229ENST00000460826 NECTIN4Q96NY8 510 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 KCNK16Q96T55 309 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 SMOQ99835 787 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 GPR88Q9GZN0 384 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 ACP6Q9NPH0 428 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 KRT82Q9NSB4 513 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 FAM207AQ9NSI2 230 aaPredicted RBP14.86□□□□□ -0.03
HDLBP-229ENST00000460826 BDP1A6H8Y1 2624 aa14.86□□□□□ -0.03
HDLBP-229ENST00000460826 SLC38A8A6NNN8 435 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 SERPINC1P01008 464 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 RHOP08100 348 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 PAEPP09466 180 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 KRT5P13647 590 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 UCHL3P15374 230 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 HMGA1P17096 107 aaKnown RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 SP100P23497 879 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 CCR2P41597 374 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 RPL10AP62906 217 aaKnown RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 PABPC1LQ4VXU2 614 aaKnown RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 ARHGAP17Q68EM7 881 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 DNAJB7Q7Z6W7 309 aaPredicted RBP14.85□□□□□ -0.03
HDLBP-229ENST00000460826 ELMOD1Q8N336 334 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 ITFG1Q8TB96 612 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 JAKMIP2Q96AA8 810 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 SMARCD1Q96GM5 515 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 FAM81BQ96LP2 452 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 ASB3Q9Y575 518 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 ATP8B3O60423 1300 aa14.85□□□□□ -0.03
HDLBP-229ENST00000460826 TRIM66O15016 1216 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 MOSPD3O75425 235 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 VDRP11473 427 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 MYL4P12829 197 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 GJA1P17302 382 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 BRD2P25440 801 aaKnown RBP14.84□□□□□ -0.03
HDLBP-229ENST00000460826 USP8P40818 1118 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 EPHA5P54756 1037 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 POLR2FP61218 127 aaKnown RBP14.84□□□□□ -0.03
HDLBP-229ENST00000460826 USP46P62068 366 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 RAPGEF1Q13905 1077 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 DRAP1Q14919 205 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-229ENST00000460826 NR1I3Q14994 352 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 GOLGA7BQ2TAP0 167 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 FILIP1LQ4L180 1135 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 SGO2Q562F6 1265 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 PRSS36Q5K4E3 855 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 POTEHQ6S545 545 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 CLEC20AQ6ZU45 233 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 TTC30AQ86WT1 665 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 C8orf48Q96LL4 319 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 PCMTD1Q96MG8 357 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-229ENST00000460826 PHF7Q9BWX1 381 aaPredicted RBP14.84□□□□□ -0.03
HDLBP-229ENST00000460826 RBSNQ9H1K0 784 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 IL21Q9HBE4 155 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 NLRC4Q9NPP4 1024 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 FAM50BQ9Y247 325 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 VCANP13611 3396 aa14.84□□□□□ -0.03
HDLBP-229ENST00000460826 O00370 1275 aa14.83□□□□□ -0.04
HDLBP-229ENST00000460826 FAM200BP0CF97 657 aa14.83□□□□□ -0.04
HDLBP-229ENST00000460826 CEBPBP17676 345 aa14.83□□□□□ -0.04
HDLBP-229ENST00000460826 TRIM21P19474 475 aaKnown RBP14.83□□□□□ -0.04
HDLBP-229ENST00000460826 FSHRP23945 695 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms