RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 KRT82Q9NSB4 513 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HMGXB4Q9UGU5 601 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-206ENST00000460235 STRIP2Q9ULQ0 834 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 GBF1Q92538 1859 aa13.06□□□□□ -0.32
HDAC4-206ENST00000460235 HIDE1A8MVS5 230 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 XPO1O14980 1071 aaKnown RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 TGM5O43548 720 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CLASP2O75122 1294 aaKnown RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 MICAL2O94851 1124 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CSH1P0DML2 217 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CSH2P0DML3 217 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 HAPLN1P10915 354 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CCDC130P13994 396 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 HOXB8P17481 243 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 IGFBP4P22692 258 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 BDNFP23560 247 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 NSFP46459 744 aaKnown RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CLCN4P51793 760 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 DUSP4Q13115 394 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 ORC1Q13415 861 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CAMK1Q14012 370 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 DUSP6Q16828 381 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 PPM1LQ5SGD2 360 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 LILRA6Q6PI73 481 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 RNF19BQ6ZMZ0 732 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 NOP9Q86U38 636 aaKnown RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 LRRTM3Q86VH5 581 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 ZDHHC17Q8IUH5 632 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 GLYCTKQ8IVS8 523 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 LEMD2Q8NC56 503 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 GOLGA1Q92805 767 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 VCPIP1Q96JH7 1222 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 PDLIM2Q96JY6 352 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 SPATA17Q96L03 361 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 PGLYRP2Q96PD5 576 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 CSNK1G1Q9HCP0 422 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 TMEM51Q9NW97 253 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 ZDHHC7Q9NXF8 308 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
HDAC4-206ENST00000460235 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
HDAC4-206ENST00000460235 FBXO21O94952 628 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 CALB1P05937 261 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 POU2F2P09086 479 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 OR4Q2P0C623 313 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 PNMA6AP0CW24 399 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-206ENST00000460235 MYBL1P10243 752 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 DESP17661 470 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 CDH5P33151 784 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-206ENST00000460235 IRS1P35568 1242 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 PPP3CCP48454 512 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 NRIP1P48552 1158 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 KRT83P78385 493 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 PABPC1LQ4VXU2 614 aaKnown RBP13.04□□□□□ -0.32
HDAC4-206ENST00000460235 TAF3Q5VWG9 929 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 SIX6OS1Q8N1H7 587 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 ARHGAP18Q8N392 663 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 EFHBQ8N7U6 833 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 KCTD13Q8WZ19 329 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 ZNF512Q96ME7 567 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-206ENST00000460235 NHEJ1Q9H9Q4 299 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-206ENST00000460235 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
HDAC4-206ENST00000460235 TRIOBPQ9H2D6 2365 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ARHGAP6O43182 974 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 RTN2O75298 545 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 ZMYND10O75800 440 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 C8AP07357 584 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 MMEP08473 750 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SKILP12757 684 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 CYP2F1P24903 491 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 EIF4A3P38919 411 aaKnown RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 MAP3K7CLP57077 242 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SLC18A3Q16572 532 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 DENND5BQ6ZUT9 1274 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SPRED2Q7Z698 418 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 LRRC8AQ8IWT6 810 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SLC22A17Q8WUG5 538 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 DDX1Q92499 740 aaKnown RBP13.03□□□□□ -0.32
HDAC4-206ENST00000460235 SLITRK1Q96PX8 696 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 GCNAQ96QF7 691 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
HDAC4-206ENST00000460235 TMEM209Q96SK2 561 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms