RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 NOL4O94818 638 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 VNN1O95497 513 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 ASS1P00966 412 aaKnown RBP18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 HLA-DRAP01903 254 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 GLULP15104 373 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 HMGA1P17096 107 aaKnown RBP18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 BDNFP23560 247 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 MAGEA9P43362 315 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 GCLMP48507 274 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 PDE6CP51160 858 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 MLLT6P55198 1093 aaPredicted RBP18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 UBE2HP62256 183 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 GRM2Q14416 872 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 ANGPT1Q15389 498 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 KRT39Q6A163 491 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 C1orf228Q6PIY5 440 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 ZNF852Q6ZMS4 543 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 CELF5Q8N6W0 485 aaKnown RBP18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 B3GALNT2Q8NCR0 500 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 CSGALNACT1Q8TDX6 532 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 DHTKD1Q96HY7 919 aaPredicted RBP18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 FOXQ1Q9C009 403 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 SMYD3Q9H7B4 428 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 OBSL1O75147 1896 aa18.67■□□□□ 0.58
SCARNA2-201ENST00000458748 TICRRQ7Z2Z1 1910 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 COL4A2P08572 1712 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 CHADO15335 359 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 HCRTO43612 131 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 DCNP07585 359 aaKnown RBP18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 GPR15P49685 360 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 CYP4F8P98187 520 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 PLCB2Q00722 1185 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 FCHO2Q0JRZ9 810 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 ARHGAP29Q52LW3 1261 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 STXBP5Q5T5C0 1151 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 SCARA5Q6ZMJ2 495 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 TPRG1Q6ZUI0 275 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 DENND5BQ6ZUT9 1274 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 UNC93AQ86WB7 457 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 CMTM8Q8IZV2 173 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 ADSSL1Q8N142 457 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 TTC39CQ8N584 583 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 MSANTD3Q96H12 275 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 FAXDC2Q96IV6 333 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 KIF9Q9HAQ2 790 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 LTB4R2Q9NPC1 389 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 HEBP1Q9NRV9 189 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 PTPRDP23468 1912 aa18.66■□□□□ 0.58
SCARNA2-201ENST00000458748 RIF1Q5UIP0 2472 aaKnown RBP18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 ZNF638Q14966 1978 aaKnown RBP18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 PRR23AA6NEV1 266 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 FAM170BA6NMN3 283 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 F11P03951 625 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 TRIM49P0CI25 452 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 TRIM49CP0CI26 452 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 PPP3CCP48454 512 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 UBXN2BQ14CS0 331 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 MON1AQ86VX9 555 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 C8orf48Q96LL4 319 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 MED10Q9BTT4 135 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 BCO2Q9BYV7 579 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 MMRN2Q9H8L6 949 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 CYP3A43Q9HB55 503 aa18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 METTL14Q9HCE5 456 aaKnown RBP18.65■□□□□ 0.58
SCARNA2-201ENST00000458748 GREB1Q4ZG55 1949 aa18.64■□□□□ 0.58
SCARNA2-201ENST00000458748 GADD45BO75293 160 aaPredicted RBP18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 CCNE1P24864 410 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 MXI1P50539 228 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 CDH8P55286 799 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 WDR44Q5JSH3 913 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 C1orf220Q5T0J3 134 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 SDHAF4Q5VUM1 108 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 TCERG1LQ5VWI1 586 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 TMEM150AQ86TG1 271 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 MAB21L3Q8N8X9 362 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 FBXL13Q8NEE6 735 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 BPIFB1Q8TDL5 484 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 ERCC4Q92889 916 aaPredicted RBP18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 NKD2Q969F2 451 aaPredicted RBP18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 CLDN23Q96B33 292 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 RSPRY1Q96DX4 576 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 SLC46A2Q9BY10 475 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 ARMCX3Q9UH62 379 aaPredicted RBP18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 MAN1B1Q9UKM7 699 aa18.64■□□□□ 0.57
SCARNA2-201ENST00000458748 TRAV19A0A0A6YYK7 116 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 ARNTLO00327 626 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 PFKLP17858 780 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 RPS9P46781 194 aaKnown RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 RAP1GAPP47736 663 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 NOP14P78316 857 aaKnown RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 PPP3CAQ08209 521 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 ZNF268Q14587 947 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 DCAF17Q5H9S7 520 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 ANKRD40Q6AI12 368 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 CC2D1AQ6P1N0 951 aaPredicted RBP18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
SCARNA2-201ENST00000458748 C1orf210Q8IVY1 113 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms