RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 NR2F2P24468 414 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 PDE6CP51160 858 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 KPNA1P52294 538 aaPredicted RBP19.06■□□□□ 0.64
MSH6-207ENST00000456246 ZNF528Q3MIS6 628 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 SDHAF4Q5VUM1 108 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 INTS8Q75QN2 995 aaKnown RBP19.06■□□□□ 0.64
MSH6-207ENST00000456246 FRMD5Q7Z6J6 570 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 MAB21L3Q8N8X9 362 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 GTPBP4Q9BZE4 634 aaKnown RBP19.06■□□□□ 0.64
MSH6-207ENST00000456246 TDP1Q9NUW8 608 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 HOOK1Q9UJC3 728 aaKnown RBP19.06■□□□□ 0.64
MSH6-207ENST00000456246 CACNA1IQ9P0X4 2223 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 PTPRDP23468 1912 aa19.06■□□□□ 0.64
MSH6-207ENST00000456246 RIF1Q5UIP0 2472 aaKnown RBP19.06■□□□□ 0.64
MSH6-207ENST00000456246 OBSL1O75147 1896 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 ATP8B3O60423 1300 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 COL4A3Q01955 1670 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 PATJQ8NI35 1801 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 SHISA7A6NL88 538 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 PFKLP17858 780 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 PTPN1P18031 435 aaKnown RBP19.05■□□□□ 0.64
MSH6-207ENST00000456246 BDNFP23560 247 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 GRIK1P39086 918 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 SGSM1Q2NKQ1 1148 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 MDH1BQ5I0G3 518 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 DENND5BQ6ZUT9 1274 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 RALGPS2Q86X27 583 aaPredicted RBP19.05■□□□□ 0.64
MSH6-207ENST00000456246 FMR1NBQ8N0W7 255 aaPredicted RBP19.05■□□□□ 0.64
MSH6-207ENST00000456246 B3GALNT2Q8NCR0 500 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 TNIP3Q96KP6 325 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 C8orf48Q96LL4 319 aa19.05■□□□□ 0.64
MSH6-207ENST00000456246 NDRG2Q9UN36 371 aaKnown RBP19.05■□□□□ 0.64
MSH6-207ENST00000456246 TRAV19A0A0A6YYK7 116 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 PRR23AA6NEV1 266 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 TADA3O75528 432 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 SP9P0CG40 484 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 KRT13P13646 458 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 TRIM21P19474 475 aaKnown RBP19.04■□□□□ 0.64
MSH6-207ENST00000456246 PSMC2P35998 433 aaKnown RBP19.04■□□□□ 0.64
MSH6-207ENST00000456246 PPP3CCP48454 512 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 VAMP7P51809 220 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 NOP14P78316 857 aaKnown RBP19.04■□□□□ 0.64
MSH6-207ENST00000456246 LRRC32Q14392 662 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 EDRF1Q3B7T1 1238 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 TXNDC8Q6A555 127 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 MAMSTRQ6ZN01 415 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 SV2AQ7L0J3 742 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 ZNF687Q8N1G0 1237 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 LRRC3BQ96PB8 259 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 GSDMAQ96QA5 445 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 IMPG2Q9BZV3 1241 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 CHRDQ9H2X0 955 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 ZNF638Q14966 1978 aaKnown RBP19.04■□□□□ 0.64
MSH6-207ENST00000456246 FAM186AA6NE01 2351 aa19.04■□□□□ 0.64
MSH6-207ENST00000456246 KIF26AQ9ULI4 1882 aaPredicted RBP19.03■□□□□ 0.64
MSH6-207ENST00000456246 SMC2O95347 1197 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 VNN1O95497 513 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 USP17L7P0C7H9 530 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 CTHP32929 405 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 DLG4P78352 724 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 FAM160A1Q05DH4 1040 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 FZD5Q13467 585 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 PPP2R5DQ14738 602 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 ZCWPW2Q504Y3 356 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 CC2D1AQ6P1N0 951 aaPredicted RBP19.03■□□□□ 0.64
MSH6-207ENST00000456246 FAM186BQ8IYM0 893 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 STKLD1Q8NE28 680 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 USP13Q92995 863 aaPredicted RBP19.03■□□□□ 0.64
MSH6-207ENST00000456246 TTLL2Q9BWV7 592 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 SMYD3Q9H7B4 428 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 MAPK8IP1Q9UQF2 711 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 GREB1Q4ZG55 1949 aa19.03■□□□□ 0.64
MSH6-207ENST00000456246 PTPRZ1P23471 2315 aaPredicted RBP19.02■□□□□ 0.64
MSH6-207ENST00000456246 F8VP50 259 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 SPECC1L-ADORA2AF8WAN1 911 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 AKAP3O75969 853 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 ASS1P00966 412 aaKnown RBP19.02■□□□□ 0.64
MSH6-207ENST00000456246 CKMP06732 381 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 CCNE1P24864 410 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 PIK3CAP42336 1068 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 AMPD2Q01433 879 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 ADAM9Q13443 819 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 ITPRIPL2Q3MIP1 535 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 COBLL1Q53SF7 1204 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 GPIHBP1Q8IV16 184 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 TIGD1Q96MW7 591 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 FAM126AQ9BYI3 521 aaPredicted RBP19.02■□□□□ 0.64
MSH6-207ENST00000456246 SMG9Q9H0W8 520 aaKnown RBP19.02■□□□□ 0.64
MSH6-207ENST00000456246 DPEP3Q9H4B8 488 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 PRMT8Q9NR22 394 aaPredicted RBP19.02■□□□□ 0.64
MSH6-207ENST00000456246 TRPM5Q9NZQ8 1165 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 NME7Q9Y5B8 376 aa19.02■□□□□ 0.64
MSH6-207ENST00000456246 FANCMQ8IYD8 2048 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 TCF3P15923 654 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 GTF2H1P32780 548 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 PNOCQ13519 176 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 PDGFRLQ15198 375 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 DGKKQ5KSL6 1271 aa19.01■□□□□ 0.63
MSH6-207ENST00000456246 SCARA5Q6ZMJ2 495 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms