RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 TRIM43Q96BQ3 446 aaPredicted RBP11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 ALKBH8Q96BT7 664 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 ANKRD27Q96NW4 1050 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 RBM15Q96T37 977 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 NCAPGQ9BPX3 1015 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 PI4K2AQ9BTU6 479 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 DDX23Q9BUQ8 820 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 STARD13Q9Y3M8 1113 aa11.13□□□□□ -0.63
GTF3C2-206ENST00000454704 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TCRBV5S1A1TA0A578 114 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 LRRIQ4A6NIV6 560 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TCP11X1B4DZS4 312 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 OGTO15294 1046 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 ALOX15BO15296 676 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 MAFO75444 373 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 WFS1O76024 890 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 KRT1P04264 644 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TAS2R40P59535 323 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 ELF3P78545 371 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 BNIP1Q12981 228 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 CDCA2Q69YH5 1023 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TRABD2AQ86V40 505 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 THNSL1Q8IYQ7 743 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 ASAP3Q8TDY4 903 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 ATG4AQ8WYN0 398 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 MAML1Q92585 1016 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 LENG1Q96BZ8 264 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 RAB3IPQ96QF0 476 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 MMP19Q99542 508 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 CDX2Q99626 313 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 SH2D3AQ9BRG2 576 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 FRMD8Q9BZ67 464 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 MIS12Q9H081 205 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 LHX5Q9H2C1 402 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 APOBEC3GQ9HC16 384 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 KCNK9Q9NPC2 374 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 XPNPEP3Q9NQH7 507 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 GEMIN8Q9NWZ8 242 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 RPL26L1Q9UNX3 145 aaKnown RBP11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 NAALADL1Q9UQQ1 740 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 RIPK3Q9Y572 518 aa11.12□□□□□ -0.63
GTF3C2-206ENST00000454704 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 EXOC1LA0A1B0GW35 172 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 SPAG6O75602 509 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 DCTN3O75935 186 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 IL18RAPO95256 599 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 ATP6V1G2O95670 118 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 SLC25A27O95847 323 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 RARBP10826 455 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 ALADP13716 330 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 NQO1P15559 274 aaKnown RBP11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 ALDH3A1P30838 453 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 IFNAR2P48551 515 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 TLE2Q04725 743 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 OASLQ15646 514 aaKnown RBP11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 KYAT1Q16773 422 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 DUOXA2Q1HG44 320 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 KLHL38Q2WGJ6 581 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 P3H1Q32P28 736 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 DCUN1D2Q6PH85 259 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 UHMK1Q8TAS1 419 aaKnown RBP11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 SMC6Q96SB8 1091 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 MYCBPQ99417 103 aaPredicted RBP11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 R3HDM2Q9Y2K5 976 aaKnown RBP11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
GTF3C2-206ENST00000454704 RASA4BC9J798 803 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 RASA4O43374 803 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 B4GALT4O60513 344 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ZWINTO95229 277 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ASMTLO95671 621 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 PGK1P00558 417 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TNNC2P02585 160 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 CCNB1P14635 433 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 EDNRBP24530 442 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ITGB8P26012 769 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 SSR1P43307 286 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 ACOT2P49753 483 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 SLC26A2P50443 739 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 RASSF2P50749 326 aa11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 RNASELQ05823 741 aaKnown RBP11.1□□□□□ -0.63
GTF3C2-206ENST00000454704 TRPC3Q13507 836 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms