RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 SPTLC1O15269 473 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 DKC1O60832 514 aaKnown RBP eCLIP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 GAS7O60861 476 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 RPL5P46777 297 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 RELAQ04206 551 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 LRRC36Q1X8D7 754 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 ZNF280DQ6N043 979 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 OR6Y1Q8NGX8 325 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 TAS2R1Q9NYW7 299 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 ANAPC5Q9UJX4 755 aa14.09□□□□□ -0.15
SYNGAP1-204ENST00000449372 USP1O94782 785 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 NAA20P61599 178 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 SPP2Q13103 211 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 Q6ZNX1 250 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 C3orf62Q6ZUJ4 267 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 DAW1Q8N136 415 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 LNX1Q8TBB1 728 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ART4Q93070 314 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 RAVER2Q9HCJ3 691 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 GTF3C4Q9UKN8 822 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 KIAA1217Q5T5P2 1943 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ADGRA3Q8IWK6 1321 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 RASA4BC9J798 803 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 FBP2O00757 339 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 RASA4O43374 803 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 MTA2O94776 668 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 STK10O94804 968 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 MAPTP10636 758 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 TMED10P49755 219 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 HNRNPDQ14103 355 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 TKFCQ3LXA3 575 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 SMUG1Q53HV7 270 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 MCF2L2Q86YR7 1114 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 NAALADL1Q9UQQ1 740 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 PTPN22Q9Y2R2 807 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 POLR2AP24928 1970 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 VWA5AO00534 786 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 SPAG7O75391 227 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 CLPTM1O96005 669 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 PTPRAP18433 802 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 BACE1P56817 501 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 CENPCQ03188 943 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 CYP1B1Q16678 543 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ENOSF1Q7L5Y1 443 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZNF564Q8TBZ8 553 aaPredicted RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 TMEM174Q8WUU8 243 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 CASP10Q92851 521 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 PTCD3Q96EY7 689 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZMAT2Q96NC0 199 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 TEKT3Q9BXF9 490 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 THAP2Q9H0W7 228 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 OSGEPQ9NPF4 335 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 DCTN4Q9UJW0 460 aa14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 HBS1LQ9Y450 684 aaKnown RBP14.08□□□□□ -0.16
SYNGAP1-204ENST00000449372 EIF3FO00303 357 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 CBFA2T3O75081 653 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 CHN2P52757 468 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 TBL3Q12788 808 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 SPARCL1Q14515 664 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 SDR16C5Q8N3Y7 309 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 C12orf50Q8NA57 414 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 RPAP3Q9H6T3 665 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 HESX1Q9UBX0 185 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 FAM32AQ9Y421 112 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 TELO2Q9Y4R8 837 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 TXNDC9O14530 226 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 PDGFRBP09619 1106 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 PIM1P11309 404 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 ESRRAP11474 423 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 UQCRBP14927 111 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 PCSK6P29122 969 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 ADCY8P40145 1251 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 MXI1P50539 228 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 NEK2P51955 445 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 LPIN1Q14693 890 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 PGM5Q15124 567 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 ADRM1Q16186 407 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 C6orf163Q5TEZ5 329 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 RAPH1Q70E73 1250 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 EURLQ9NYK6 297 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 SMG5Q9UPR3 1016 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 ANKRD63C9JTQ0 380 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 F8W8V4 182 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 MATN2O00339 956 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 CHMP2AO43633 222 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 VCLP18206 1134 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 PDK3Q15120 406 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 KCTD21Q4G0X4 260 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 ZNF720Q7Z2F6 126 aa14.07□□□□□ -0.16
SYNGAP1-204ENST00000449372 LRRC6Q86X45 466 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms