RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DUSP16Q9BY84 665 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ISCUQ9H1K1 167 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ABCB6Q9NP58 842 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 KRT82Q9NSB4 513 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ADGRG1Q9Y653 693 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 COL4A4P53420 1690 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 WDR27A2RRH5 827 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 MTMR11A4FU01 709 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 RTN2O75298 545 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 IPO7O95373 1038 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 VNN2O95498 520 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 CXCL14O95715 111 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 NPR3P17342 541 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 NDUFV1P49821 464 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ARPP19P56211 112 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 RAB33AQ14088 237 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 LRIT3Q3SXY7 679 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 RNF19BQ6ZMZ0 732 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SPPL2BQ8TCT7 592 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 SLC35F5Q8WV83 523 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 CSNK1G1Q9HCP0 422 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 NGRNQ9NPE2 291 aaKnown RBP14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ENTPD7Q9NQZ7 604 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 CYTH4Q9UIA0 394 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 PCDHB5Q9Y5E4 795 aa14.87□□□□□ -0.03
SHMT2-203ENST00000449049 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 XPO1O14980 1071 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 ABLIM3O94929 683 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 BDNFP23560 247 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 NSFP46459 744 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 KRT83P78385 493 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PDE4CQ08493 712 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 CLEC20AQ6ZU45 233 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PHF13Q86YI8 300 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 STK32AQ8WU08 396 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 CPA5Q8WXQ8 436 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 SMOQ99835 787 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 RHOBTB2Q9BYZ6 727 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 CERS4Q9HA82 394 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 TMEM30AQ9NV96 361 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PATJQ8NI35 1801 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 TMCO5BA8MYB1 307 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 TEX28O15482 410 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 AP1G2O75843 785 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 BEST1O76090 585 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 CNPP09543 421 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 MAGEA11P43364 429 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PLA2G4AP47712 749 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 CACNA2D1P54289 1103 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PDCLQ13371 301 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 TPGS2Q68CL5 300 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PDE12Q6L8Q7 609 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 MRPL43Q8N983 215 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 ZNF461Q8TAF7 563 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PGLYRP2Q96PD5 576 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 LMAN2LQ9H0V9 348 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
SHMT2-203ENST00000449049 PCDHA13Q9Y5I0 950 aa14.86□□□□□ -0.03
SHMT2-203ENST00000449049 TULP2O00295 520 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 FTLP02792 175 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-203ENST00000449049 CCDC175P0C221 793 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 MMP8P22894 467 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 MAGEA1P43355 309 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 RPL34P49207 117 aaKnown RBP14.85□□□□□ -0.03
SHMT2-203ENST00000449049 CDR1P51861 262 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 SLC8A3P57103 927 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 PLPP4Q5VZY2 271 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 VSTM1Q6UX27 236 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 MON1BQ7L1V2 547 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 ARNTL2Q8WYA1 636 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 NOX5Q96PH1 765 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 KLHL5Q96PQ7 755 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 EMILIN2Q9BXX0 1053 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 UBXN6Q9BZV1 441 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 DMAP1Q9NPF5 467 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-203ENST00000449049 LUC7LQ9NQ29 371 aaKnown RBP14.85□□□□□ -0.03
SHMT2-203ENST00000449049 CYLDQ9NQC7 956 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 HSFX1Q9UBD0 423 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 INTUQ9ULD6 942 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 COLQQ9Y215 455 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-203ENST00000449049 ZKSCAN5Q9Y2L8 839 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 ATG2AQ2TAZ0 1938 aa14.85□□□□□ -0.03
SHMT2-203ENST00000449049 EPOPA6NHQ4 379 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 HIDE1A8MVS5 230 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 CYP2F1P24903 491 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 IRS1P35568 1242 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 VAV2P52735 878 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 MAP3K7CLP57077 242 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
SHMT2-203ENST00000449049 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
SHMT2-203ENST00000449049 PTP4A2Q12974 167 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 PTPN20Q4JDL3 420 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 PMF1Q6P1K2 205 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 DNAAF5Q86Y56 855 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 ATAD1Q8NBU5 361 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 VCPIP1Q96JH7 1222 aa14.84□□□□□ -0.03
SHMT2-203ENST00000449049 SLC4A5Q9BY07 1137 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms