RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PLEKHG4Q58EX7 1191 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 FAM26DQ5JW98 314 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 SLC39A4Q6P5W5 647 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 C6orf89Q6UWU4 347 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 RRAGAQ7L523 313 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 NPAS4Q8IUM7 802 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 WDR49Q8IV35 697 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 C12orf56Q8IXR9 622 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 TMEM192Q8IY95 271 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 DRAXINQ8NBI3 349 aaPredicted RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 FAM84AQ96KN4 292 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 NOX5Q96PH1 765 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 GBP5Q96PP8 586 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 NSRP1Q9H0G5 558 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 VCXQ9H320 206 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 KCNK9Q9NPC2 374 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 INTS9Q9NV88 658 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 CNOT8Q9UFF9 292 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 PCDHB4Q9Y5E5 795 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 THSD7BQ9C0I4 1608 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 SMIM28A0A1B0GU29 152 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 ARL5CA6NH57 179 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 PPFIA2O75334 1257 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 NQO1P15559 274 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 GBP1P32455 592 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 HOXD13P35453 343 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 EIF4A3P38919 411 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 TAF6P49848 677 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 MFAP3P55082 362 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 MGAT3Q09327 533 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 SGSM1Q2NKQ1 1148 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.26□□□□□ -1.41
PROM1-201ENST00000447510 CEP128Q6ZU80 1094 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 TRPM8Q7Z2W7 1104 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 LRRC34Q8IZ02 419 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 IQCKQ8N0W5 287 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 FAM81AQ8TBF8 368 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 HPDLQ96IR7 371 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 PI4K2AQ9BTU6 479 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 TMEM117Q9H0C3 514 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 TSPYL2Q9H2G4 693 aaPredicted RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 RMI1Q9H9A7 625 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 RGS18Q9NS28 235 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 CPSF3Q9UKF6 684 aaKnown RBP6.26□□□□□ -1.41
PROM1-201ENST00000447510 PCDHA13Q9Y5I0 950 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 LCTP09848 1927 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 MYO9BQ13459 2157 aa6.26□□□□□ -1.41
PROM1-201ENST00000447510 LGALS16A8MUM7 142 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 NT5C1B-RDH14C9J2C7 533 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 RAD51CO43502 376 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 MGEA5O60502 916 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 LRRN2O75325 713 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 CHN1P15882 459 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 HOXC8P31273 242 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 MNX1P50219 401 aaPredicted RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 BCAR1P56945 870 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 DEUP1Q05D60 604 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 MBTPS1Q14703 1052 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 SLMAPQ14BN4 828 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 AMHR2Q16671 573 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 TSNAXIP1Q2TAA8 658 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 SLC10A6Q3KNW5 377 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 ZNF394Q53GI3 561 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 LRRC55Q6ZSA7 311 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 SV2AQ7L0J3 742 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 TMCO2Q7Z6W1 182 aaPredicted RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 CCDC25Q86WR0 208 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 VSIG1Q86XK7 387 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 THEM5Q8N1Q8 247 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 DDX27Q96GQ7 796 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 MED10Q9BTT4 135 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 INTS2Q9H0H0 1204 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 GOLPH3Q9H4A6 298 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 TMBIM4Q9HC24 238 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 RAB20Q9NX57 234 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 C2CD2LO14523 706 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 ATP6V1G1O75348 118 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 DNAJC8O75937 253 aaPredicted RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 SHBGP04278 402 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 CCND1P24385 295 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 MAGEA10P43363 369 aaPredicted RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 DLG4P78352 724 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 BLMHQ13867 455 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 SV2CQ496J9 727 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 LRRC43Q8N309 656 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 CCT6BQ92526 530 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 C18orf25Q96B23 403 aaPredicted RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 ZNF558Q96NG5 402 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 XPO6Q96QU8 1125 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 PRMT1Q99873 361 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 GORASP1Q9BQQ3 440 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
PROM1-201ENST00000447510 DDX47Q9H0S4 455 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 SYNCQ9H7C4 482 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.25□□□□□ -1.41
PROM1-201ENST00000447510 LIMA1Q9UHB6 759 aaKnown RBP6.25□□□□□ -1.41
PROM1-201ENST00000447510 ANKRD33BA6NCL7 494 aa6.25□□□□□ -1.41
PROM1-201ENST00000447510 PODXLO00592 558 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms