RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 AVPR1AP37288 418 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 GPR15P49685 360 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 INCA1Q0VD86 236 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 CBWD6Q4V339 395 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 CBWD3Q5JTY5 395 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 FAM78AQ5JUQ0 283 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 CBWD5Q5RIA9 395 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 SDHAF4Q5VUM1 108 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 GAREM2Q75VX8 874 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 BMP8AQ7Z5Y6 402 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 ENOX1Q8TC92 643 aaKnown RBP17.4■□□□□ 0.38
SF3A1-204ENST00000447376 DEPDC1BQ8WUY9 529 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 C8orf48Q96LL4 319 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 TASP1Q9H6P5 420 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 APOBEC3GQ9HC16 384 aaKnown RBP17.4■□□□□ 0.38
SF3A1-204ENST00000447376 WNT16Q9UBV4 365 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 COQ4Q9Y3A0 265 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 HCN4Q9Y3Q4 1203 aa17.4■□□□□ 0.38
SF3A1-204ENST00000447376 DOCK6Q96HP0 2047 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 SOBPA7XYQ1 873 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 F8VP50 259 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 STK25O00506 426 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 PMM2O15305 246 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 NOL4O94818 638 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 AFPP02771 609 aaKnown RBP17.39■□□□□ 0.37
SF3A1-204ENST00000447376 PDE6CP51160 858 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 CYP4F8P98187 520 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 CCDC142Q17RM4 750 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 FAM35AQ86V20 835 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 TRIM59Q8IWR1 403 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 CRYBG2Q8N1P7 616 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 SEMA4DQ92854 862 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 CNOT6LQ96LI5 555 aaKnown RBP17.39■□□□□ 0.37
SF3A1-204ENST00000447376 NT5C1BQ96P26 610 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 B3GNT5Q9BYG0 378 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 SDCBP2Q9H190 292 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 DMAP1Q9NPF5 467 aaPredicted RBP17.39■□□□□ 0.37
SF3A1-204ENST00000447376 SLC2A4RGQ9NR83 387 aa17.39■□□□□ 0.37
SF3A1-204ENST00000447376 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 MYO10Q9HD67 2058 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 NARSO43776 548 aaKnown RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 CILPO75339 1184 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 MOSPD3O75425 235 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 AP1G2O75843 785 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 RTN3O95197 1032 aaPredicted RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 HMGA1P17096 107 aaKnown RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 MTIF2P46199 727 aaKnown RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 PPP3CCP48454 512 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 SLC8A3P57103 927 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 TANGO2Q6ICL3 276 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 FBXL6Q8N531 539 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 ST13P5Q8NFI4 369 aaPredicted RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 ASIC4Q96FT7 647 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 SHDQ96IW2 340 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 MYRFLQ96LU7 910 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 SLITRK1Q96PX8 696 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 MED15Q96RN5 788 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 TRMT61BQ9BVS5 477 aaKnown RBP17.38■□□□□ 0.37
SF3A1-204ENST00000447376 ZNF518BQ9C0D4 1074 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 TRPV4Q9HBA0 871 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 C11orf16Q9NQ32 467 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 CISHQ9NSE2 258 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 FAM49BQ9NUQ9 324 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 TRPM5Q9NZQ8 1165 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 NFE2L3Q9Y4A8 694 aa17.38■□□□□ 0.37
SF3A1-204ENST00000447376 SYCE3A1L190 88 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 CLDN5O00501 218 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 FAM200BP0CF97 657 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 PRKCSHP14314 528 aaPredicted RBP17.37■□□□□ 0.37
SF3A1-204ENST00000447376 PSMC3P17980 439 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 MYL5Q02045 173 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 IFRD2Q12894 506 aaPredicted RBP17.37■□□□□ 0.37
SF3A1-204ENST00000447376 ORC1Q13415 861 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 CUL2Q13617 745 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 HFE2Q6ZVN8 426 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 SIX5Q8N196 739 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 NUP93Q8N1F7 819 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 ANKRD20A12PQ8NF67 263 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 SLC2A14Q8TDB8 520 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 IRF7Q92985 503 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 HEXIM2Q96MH2 286 aaKnown RBP17.37■□□□□ 0.37
SF3A1-204ENST00000447376 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 SMOC2Q9H3U7 446 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 BRD9Q9H8M2 597 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 IL21Q9HBE4 155 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 TRPC7Q9HCX4 862 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 KRT82Q9NSB4 513 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 THG1LQ9NWX6 298 aaKnown RBP17.37■□□□□ 0.37
SF3A1-204ENST00000447376 NME7Q9Y5B8 376 aa17.37■□□□□ 0.37
SF3A1-204ENST00000447376 F11P03951 625 aa17.36■□□□□ 0.37
SF3A1-204ENST00000447376 TPM2P07951 284 aa17.36■□□□□ 0.37
SF3A1-204ENST00000447376 EEF1GP26641 437 aaKnown RBP17.36■□□□□ 0.37
SF3A1-204ENST00000447376 ADORA2BP29275 332 aa17.36■□□□□ 0.37
SF3A1-204ENST00000447376 WEE1P30291 646 aa17.36■□□□□ 0.37
SF3A1-204ENST00000447376 GPC5P78333 572 aa17.36■□□□□ 0.37
SF3A1-204ENST00000447376 LRMPQ12912 555 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms