RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ZC3H11AO75152 810 aaKnown RBP eCLIP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ECI2O75521 394 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 GLUD1P00367 558 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CFIP05156 583 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 NME1P15531 152 aaKnown RBP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 SLC16A2P36021 539 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CLDN6P56747 220 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 RNF4P78317 190 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 IGBP1P78318 339 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CHRNEQ04844 493 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CALD1Q05682 793 aaKnown RBP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 SSPNQ14714 243 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 STXBP2Q15833 593 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 MAPK6Q16659 721 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CCDC157Q569K6 752 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 MARCH8Q5T0T0 291 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 C12orf60Q5U649 245 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 DIEXFQ68CQ4 756 aaKnown RBP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 PMS2CLQ68D20 193 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ZNF280BQ86YH2 543 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 SLITRK4Q8IW52 837 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 LCORLQ8N3X6 602 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 MLXIPQ9HAP2 919 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 COL20A1Q9P218 1284 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ST3GAL5Q9UNP4 418 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 GINS2Q9Y248 185 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 TRPV2Q9Y5S1 764 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ATMQ13315 3056 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 ATXN2Q99700 1313 aaKnown RBP5.73□□□□□ -1.49
SDCBP-205ENST00000447267 IGSF9BQ9UPX0 1349 aa5.73□□□□□ -1.49
SDCBP-205ENST00000447267 A1L4Q6 167 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 B4DLN1 442 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 TNFRSF10CO14798 259 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 NRDCO43847 1150 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 C8BP07358 591 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 GALTP07902 379 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 GDI1P31150 447 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MRPL12P52815 198 aaKnown RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 DUSP4Q13115 394 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 GRM4Q14833 912 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 PON2Q15165 354 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 PREPLQ4J6C6 727 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 PDXDC1Q6P996 788 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 HS2ST1Q7LGA3 356 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 TICAM1Q8IUC6 712 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 SPPL2CQ8IUH8 684 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 NAXDQ8IW45 347 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MINDY1Q8N5J2 469 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 ZNF655Q8N720 491 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MKL1Q969V6 931 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 TRMT61BQ9BVS5 477 aaKnown RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 ARMT1Q9H993 441 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 PRDM16Q9HAZ2 1276 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MRPL17Q9NRX2 175 aaKnown RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 C1orf112Q9NSG2 853 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 HCFC1R1Q9NWW0 138 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 KIAA1522Q9P206 1035 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 SQORQ9Y6N5 450 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 TLN1Q9Y490 2541 aaKnown RBP5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MYH8P13535 1937 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 MYH15Q9Y2K3 1946 aa5.72□□□□□ -1.49
SDCBP-205ENST00000447267 FLNCQ14315 2725 aa5.71□□□□□ -1.49
SDCBP-205ENST00000447267 IGKV6D-41A0A0C4DH26 115 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 SLC38A8A6NNN8 435 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 CCL16O15467 120 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 TGM5O43548 720 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 ATP9AO75110 1047 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 RPS6KA5O75582 802 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 CLEC3AO75596 197 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 CENPBP07199 599 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-205ENST00000447267 SLC1A4P43007 532 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 SP4Q02446 784 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 PPFIA1Q13136 1202 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 LONRF3Q496Y0 759 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 DGKKQ5KSL6 1271 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 GMCL1P1Q8NEA9 526 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 CEP95Q96GE4 821 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 SLC6A18Q96N87 628 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 DNAJC2Q99543 621 aaKnown RBP5.71□□□□□ -1.5
SDCBP-205ENST00000447267 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.71□□□□□ -1.5
SDCBP-205ENST00000447267 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 TPSD1Q9BZJ3 242 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 GBP3Q9H0R5 595 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 ELAC1Q9H777 363 aaKnown RBP5.71□□□□□ -1.5
SDCBP-205ENST00000447267 ERVK13-1Q9NX77 482 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 GFOD1Q9NXC2 390 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 DNAJB4Q9UDY4 337 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 TUBE1Q9UJT0 475 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 CSMD1Q96PZ7 3565 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 GREB1LQ9C091 1923 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-205ENST00000447267 ICE1Q9Y2F5 2266 aa5.71□□□□□ -1.5
SDCBP-205ENST00000447267 SPG11Q96JI7 2443 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 FADS2P1A8MWK0 482 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 M0QZ92 97 aa5.7□□□□□ -1.5
SDCBP-205ENST00000447267 MEIS1O00470 390 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms