RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 TRAF3IP3Q9Y228 551 aa11.62□□□□□ -0.55
SF3A1-203ENST00000444440 MYO18AQ92614 2054 aaKnown RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 C2orf78A6NCI8 922 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 AKAP3O75969 853 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 FGF19O95750 216 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 CCNE1P24864 410 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 GNL1P36915 607 aaPredicted RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 TNNC1P63316 161 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ZXDBP98169 803 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 MTAPQ13126 283 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ORC1Q13415 861 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 BIRC3Q13489 604 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 NCOA4Q13772 614 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 GAS6Q14393 721 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 TAF12Q16514 161 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ZACNQ401N2 412 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 CEP135Q66GS9 1140 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 TRIM68Q6AZZ1 485 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF852Q6ZMS4 543 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 PAQR9Q6ZVX9 377 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 GOLGA5Q8TBA6 731 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 BPIFB1Q8TDL5 484 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 FAM3CQ92520 227 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF518BQ9C0D4 1074 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 VRTNQ9H8Y1 702 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 RBM12Q9NTZ6 932 aaKnown RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 SPATA6Q9NWH7 488 aaPredicted RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 C2orf42Q9NWW7 574 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 OBP2AQ9NY56 170 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF292O60281 2723 aa11.61□□□□□ -0.55
SF3A1-203ENST00000444440 OTOGLQ3ZCN5 2332 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 F8VP50 259 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 SPECC1L-ADORA2AF8WAN1 911 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 PHACTR2O75167 634 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 CHRNB1P11230 501 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 ARSAP15289 507 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 PTPN1P18031 435 aaKnown RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 NR2F2P24468 414 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 CTHP32929 405 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 RPS9P46781 194 aaKnown RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 RPL10AP62906 217 aaKnown RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 PPP3CAQ08209 521 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 TRPC3Q13507 836 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 KCNB1Q14721 858 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 NFIL3Q16649 462 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF699Q32M78 642 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 NAIF1Q69YI7 327 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 C4orf50Q6ZRC1 276 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 Q6ZS52 159 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 MON1AQ86VX9 555 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 GUF1Q8N442 669 aaKnown RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 B3GALNT2Q8NCR0 500 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 SYAP1Q96A49 352 aaPredicted RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 E2F7Q96AV8 911 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 GCNAQ96QF7 691 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 BCO2Q9BYV7 579 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 APOBEC3GQ9HC16 384 aaKnown RBP11.6□□□□□ -0.55
SF3A1-203ENST00000444440 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
SF3A1-203ENST00000444440 CEP192Q8TEP8 1941 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 GOLGA6L4A6NEF3 574 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 A8MXQ7 604 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 DPYSL4O14531 572 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 HLA-DRAP01903 254 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 TDGF1P13385 188 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ATICP31939 592 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 GRIK1P39086 918 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ASPAP45381 313 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 PMS1P54277 932 aaKnown RBP11.59□□□□□ -0.55
SF3A1-203ENST00000444440 USP4Q13107 963 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 PON2Q15165 354 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF77Q15935 545 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ARHGAP29Q52LW3 1261 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ZNF667Q5HYK9 610 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 VSTM1Q6UX27 236 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 CELF5Q8N6W0 485 aaKnown RBP11.59□□□□□ -0.55
SF3A1-203ENST00000444440 ARL14EPQ8N8R7 260 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-203ENST00000444440 CSGALNACT1Q8TDX6 532 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
SF3A1-203ENST00000444440 NKD2Q969F2 451 aaPredicted RBP11.59□□□□□ -0.55
SF3A1-203ENST00000444440 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 SPATA17Q96L03 361 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 TWNKQ96RR1 684 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 FAM83CQ9BQN1 747 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 CHRDQ9H2X0 955 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 EBF3Q9H4W6 596 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 LMAN1LQ9HAT1 526 aa11.59□□□□□ -0.55
SF3A1-203ENST00000444440 TRPC7Q9HCX4 862 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms