RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SHISA7A6NL88 538 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 FAM170BA6NMN3 283 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 CETN3O15182 167 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 DCNP07585 359 aaKnown RBP20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 ANXA13P27216 316 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 GRIK1P39086 918 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 PRCPP42785 496 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 NOP14P78316 857 aaKnown RBP20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 ANGPT1Q15389 498 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 MDH1BQ5I0G3 518 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 BPIFB1Q8TDL5 484 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 CLDN23Q96B33 292 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 LRRC3BQ96PB8 259 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 BCO2Q9BYV7 579 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 SMYD3Q9H7B4 428 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 KIF9Q9HAQ2 790 aa20.07■□□□□ 0.8
ATPAF2-201ENST00000444058 PROB1E7EW31 1015 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 KINO60870 393 aaKnown RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 PRAMEF12O95522 483 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 PFKLP17858 780 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 RPS9P46781 194 aaKnown RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 PPP3CCP48454 512 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 PPP3CAQ08209 521 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 ZNF268Q14587 947 aaPredicted RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 UBXN2BQ14CS0 331 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 DENND5BQ6ZUT9 1274 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 UNC93AQ86WB7 457 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 MAB21L3Q8N8X9 362 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 CSGALNACT1Q8TDX6 532 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 NUP210Q8TEM1 1887 aaPredicted RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 TTLL2Q9BWV7 592 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 IMPG2Q9BZV3 1241 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 DPEP3Q9H4B8 488 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 TDP1Q9NUW8 608 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 THG1LQ9NWX6 298 aaKnown RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 MTF2Q9Y483 593 aaPredicted RBP20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 PIAS3Q9Y6X2 628 aa20.06■□□□□ 0.8
ATPAF2-201ENST00000444058 F5P12259 2224 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 STX10O60499 249 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 TADA3O75528 432 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 HLA-DRAP01903 254 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 CD72P21854 359 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 PPP1R2P41236 205 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 NBL1P41271 181 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 PIK3CAP42336 1068 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 GCLMP48507 274 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 MRE11P49959 708 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 CDH8P55286 799 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 FKBP3Q00688 224 aaKnown RBP20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 LRRC63Q05C16 580 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 TXNDC8Q6A555 127 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 C1orf210Q8IVY1 113 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 ZC3H3Q8IXZ2 948 aaKnown RBP20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 ADSSL1Q8N142 457 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 ZNF687Q8N1G0 1237 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 CRYBG2Q8N1P7 616 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 FAXDC2Q96IV6 333 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 TSG101Q99816 390 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 C8orf33Q9H7E9 229 aaPredicted RBP20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 TMEM8AQ9HCN3 771 aa20.05■□□□□ 0.8
ATPAF2-201ENST00000444058 ATP8B3O60423 1300 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 F8VP50 259 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 SLC16A3O15427 465 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 CLSTN1O94985 981 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 TRIM49P0CI25 452 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 TRIM49CP0CI26 452 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 EPB41P11171 864 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 TARSP26639 723 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 ASPAP45381 313 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 PDE6CP51160 858 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 KRT39Q6A163 491 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 ALYREFQ86V81 257 aaKnown RBP20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 CCDC150Q8NCX0 1101 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 TAS1R2Q8TE23 839 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 USP13Q92995 863 aaPredicted RBP20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 B3GNT5Q9BYG0 378 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 SDCBP2Q9H190 292 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 CYP3A43Q9HB55 503 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 COL4A2P08572 1712 aa20.04■□□□□ 0.8
ATPAF2-201ENST00000444058 LRRN2O75325 713 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 TRIM21P19474 475 aaKnown RBP20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 RAP1GAPP47736 663 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 FZD5Q13467 585 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 STIM1Q13586 685 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 MAMSTRQ6ZN01 415 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 RALGPS2Q86X27 583 aaPredicted RBP20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 GPIHBP1Q8IV16 184 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 FAM3CQ92520 227 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 DHTKD1Q96HY7 919 aaPredicted RBP20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 PHOX2BQ99453 314 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 FAM83CQ9BQN1 747 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 IER2Q9BTL4 223 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 ZNF518BQ9C0D4 1074 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 DENND4CQ5VZ89 1909 aa20.03■□□□□ 0.8
ATPAF2-201ENST00000444058 PTPRDP23468 1912 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 TRAV19A0A0A6YYK7 116 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 PSMA7O14818 248 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 USP17L7P0C7H9 530 aa20.02■□□□□ 0.8
ATPAF2-201ENST00000444058 INCA1Q0VD86 236 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms