RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 FUKQ8N0W3 1084 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 UBL4BQ8N7F7 174 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 SLC35F5Q8WV83 523 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 HES6Q96HZ4 224 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 HNRNPABQ99729 332 aaKnown RBP10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 ACBD6Q9BR61 282 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 COLEC11Q9BWP8 271 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 ZMYND15Q9H091 742 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 CRTAC1Q9NQ79 661 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 HCSTQ9UBK5 93 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 ADAM28Q9UKQ2 775 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 FAN1Q9Y2M0 1017 aa10.03□□□□□ -0.8
SMPD4P1-203ENST00000443839 FNDC1Q4ZHG4 1894 aaPredicted RBP10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 MYBPHLA2RUH7 354 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 MIF4GDA9UHW6 222 aaKnown RBP10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 CLDN5O00501 218 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 EFCAB14O75071 495 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM200BP0CF97 657 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 TYMPP19971 482 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 GABRB2P47870 512 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 SLC11A1P49279 550 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 TSPY1Q01534 308 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 ZNF268Q14587 947 aaPredicted RBP10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM102AQ5T9C2 384 aaPredicted RBP10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 MYCBPAPQ8TBZ2 947 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 STK32AQ8WU08 396 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 PCED1BQ96HM7 432 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 KRT82Q9NSB4 513 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 IP6K2Q9UHH9 426 aa10.02□□□□□ -0.81
SMPD4P1-203ENST00000443839 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.815e-10■■■■■ 55.1
SMPD4P1-203ENST00000443839 TCRBV5S1A1TA0A578 114 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTAGE15A4D2H0 777 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMEM191CA6NGB0 347 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 DGKIO75912 1065 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PROSCO94903 275 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTAGE8P0CG41 777 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 ACRP10323 421 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 NPR3P17342 541 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PBX3P40426 434 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SLC1A1P43005 524 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PAFAH1B1P43034 410 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 ALDH7A1P49419 539 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 GSCP56915 257 aaPredicted RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PLCB3Q01970 1234 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 INTS6LQ5JSJ4 861 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 OR6B2Q6IFH4 312 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM117BQ6P1L5 589 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 UBE2Q1Q7Z7E8 422 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTAGE6Q86UF2 777 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CEP57Q86XR8 500 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CREG2Q8IUH2 290 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CTAGE4Q8IX94 777 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 LRRN4CLQ8ND94 238 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 RTP3Q9BQQ7 232 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMEM175Q9BSA9 504 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 DUSP16Q9BY84 665 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 B3GNT5Q9BYG0 378 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 METTL5Q9NRN9 209 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 LCMT1Q9UIC8 334 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CCDC66A2RUB6 948 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SIGLEC16A6NMB1 481 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 NT5C1B-RDH14C9J2C7 533 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 STK25O00506 426 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 XPO1O14980 1071 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SYN3O14994 580 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CEP104O60308 925 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 GALTP07902 379 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 RFC1P35251 1148 aaPredicted RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SSR1P43307 286 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 WDR5P61964 334 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 MAPRE1Q15691 268 aaKnown RBP10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CFAP221Q4G0U5 840 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM171A1Q5VUB5 890 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM183BPQ6ZVS7 135 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 OTOP2Q7RTS6 562 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 TMEM110Q86TL2 294 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 OR10T2Q8NGX3 314 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 MCRS1Q96EZ8 462 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 PBKQ96KB5 322 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 MARCH5Q9NX47 278 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 USTQ9Y2C2 406 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 LTBP2Q14767 1821 aa10.01□□□□□ -0.81
SMPD4P1-203ENST00000443839 CES2O00748 559 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 AP1G2O75843 785 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 BAIAP3O94812 1187 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 LCP1P13796 627 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 ACADSBP45954 432 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 MAP3K7CLP57077 242 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 RNASE9P60153 205 aaKnown RBP10□□□□□ -0.81
SMPD4P1-203ENST00000443839 DEFB103AP81534 67 aa10□□□□□ -0.81
SMPD4P1-203ENST00000443839 ELAVL2Q12926 359 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms