RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 AGPAT3Q9NRZ7 376 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 PCDHGC3Q9UN70 934 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 STX8Q9UNK0 236 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 BTAF1O14981 1849 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 HEATR9A2RTY3 570 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 HTR3EA5X5Y0 456 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 RRP8O43159 456 aaKnown RBP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 EFCAB14O75071 495 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 PRKD3O94806 890 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 FXR1P51114 621 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 ASPHQ12797 758 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 BORAQ6PGQ7 559 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 C19orf60Q96EN9 201 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 KCNK17Q96T54 332 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 CIB1Q99828 191 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 AIFM2Q9BRQ8 373 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 BRIP1Q9BX63 1249 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 RPH3AQ9Y2J0 694 aaPredicted RBP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 R3HDM2Q9Y2K5 976 aaKnown RBP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 ZDHHC9Q9Y397 364 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 LOC100653049A0A140TA62 436 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 AP1G1O43747 822 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 KRT86O43790 486 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 KRT34O76011 436 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 PTBP1P26599 531 aaKnown RBP eCLIP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 WNT5AP41221 380 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 DPP6P42658 865 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SNAPC2Q13487 334 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SQLEQ14534 574 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 ADIPOQQ15848 244 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 PRR16Q569H4 304 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 CCDC102BQ68D86 513 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 FBXL19Q6PCT2 694 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SLC30A9Q6PML9 568 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
SYNE2-206ENST00000441438 TADA2BQ86TJ2 420 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 IFT74Q96LB3 600 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 CAMK1GQ96NX5 476 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 VTA1Q9NP79 307 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 POLE3Q9NRF9 147 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 MYO6Q9UM54 1294 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
SYNE2-206ENST00000441438 H0YIN7 160 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 FOXP2O15409 715 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 ZBTB48P10074 688 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 ADSLP30566 484 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 CCT6AP40227 531 aaKnown RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 ARCN1P48444 511 aaKnown RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 DDR1Q08345 913 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 GRB10Q13322 594 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 AANATQ16613 207 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 CCDC153Q494R4 210 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 FBXW10Q5XX13 1052 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 OR9A1PQ8NGU1 263 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 CALML6Q8TD86 181 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 TSPEARQ8WU66 669 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 PINK1Q9BXM7 581 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 REXO4Q9GZR2 422 aaKnown RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 VPS16Q9H269 839 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 ATP13A3Q9H7F0 1226 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 IL19Q9UHD0 177 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 RCOR1Q9UKL0 485 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 STK38LQ9Y2H1 464 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 NAALAD2Q9Y3Q0 740 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 BCORQ6W2J9 1755 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 IGSF1Q8N6C5 1336 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 hCG_1807616A0A1W2PRN6 198 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 UBE2CO00762 179 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 KPNA5O15131 536 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 ALOX5P09917 674 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 PRR35P0CG20 571 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 RECQLP46063 649 aaPredicted RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 KCNJ10P78508 379 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 HTRA3P83110 453 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 LZICQ8WZA0 190 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 SORBS1Q9BX66 1292 aaKnown RBP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.64
SYNE2-206ENST00000441438 DLG5Q8TDM6 1919 aa11.06□□□□□ -0.64
SYNE2-206ENST00000441438 TJP1Q07157 1748 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 ST18O60284 1047 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 HNRNPLP14866 589 aaKnown RBP eCLIP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CTRB1P17538 263 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 PRKACAP17612 351 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 PTPN2P17706 415 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 STARD6P59095 220 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 HERC3Q15034 1050 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 EFHC1Q5JVL4 640 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 MAP3K21Q5TCX8 1036 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 CTRB2Q6GPI1 263 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 SLC25A24Q6NUK1 477 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 KDM7AQ6ZMT4 941 aa11.05□□□□□ -0.64
SYNE2-206ENST00000441438 R3HCC1LQ7Z5L2 792 aaKnown RBP11.05□□□□□ -0.64
SYNE2-206ENST00000441438 LRRTM4Q86VH4 590 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms