RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 MFAP3P55082 362 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 GEMIN4P57678 1058 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 MAP7Q14244 749 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 FASTKD3Q14CZ7 662 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 C6orf163Q5TEZ5 329 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 B3GNT9Q6UX72 402 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 ALKBH8Q96BT7 664 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 FAM81BQ96LP2 452 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 RIT2Q99578 217 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 LXNQ9BS40 222 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 PHACTR1Q9C0D0 580 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 AS3MTQ9HBK9 375 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 GPAMQ9HCL2 828 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 ZNF214Q9UL59 606 aaPredicted RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 IPO5O00410 1097 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 FCHO1O14526 889 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 LGR5O75473 907 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 CIB2O75838 187 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 DLDP09622 509 aaKnown RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 MXI1P50539 228 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 FSTL1Q12841 308 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 CDC16Q13042 620 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 C1orf220Q5T0J3 134 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 PHLDB2Q86SQ0 1253 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 LRRC6Q86X45 466 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 SCUBE1Q8IWY4 988 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 XXYLT1Q8NBI6 393 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 TCP10LQ8TDR4 215 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 OXNAD1Q96HP4 312 aaPredicted RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 RMDN3Q96TC7 470 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 UNC45AQ9H3U1 944 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 AVENQ9NQS1 362 aaPredicted RBP12.46□□□□□ -0.41
LTBR-203ENST00000441074 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 ZDHHC7Q9NXF8 308 aa12.46□□□□□ -0.41
LTBR-203ENST00000441074 B2RBV5 119 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CELF2O95319 508 aaKnown RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 IL1BP01584 269 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 ACTR3P61158 418 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 MORF4L2Q15014 288 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 SH2D4BQ5SQS7 431 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 TMCO4Q5TGY1 634 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CATSPERGQ6ZRH7 1159 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 RIPOR1Q6ZS17 1223 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ADGRG6Q86SQ4 1221 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 BANPQ8N9N5 519 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 DDX1Q92499 740 aaKnown RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 MRRFQ96E11 262 aaKnown RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 FAM118BQ9BPY3 351 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 NDUFA13Q9P0J0 144 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 SPDYE16A6NNV3 312 aaPredicted RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 ATP2A1O14983 1001 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ATP9BO43861 1147 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 TM7SF2O76062 418 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ASLP04424 464 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 FAM200BP0CF97 657 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ETS2P15036 469 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 VAV1P15498 845 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 DSG3P32926 999 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ARL4CP56559 192 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 HP1BP3Q5SSJ5 553 aaPredicted RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 CST9Q5W186 159 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 PADI6Q6TGC4 694 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CENPUQ71F23 418 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CHSY1Q86X52 802 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ZBED8Q8IZ13 594 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 DAW1Q8N136 415 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 ST6GALNAC4Q9H4F1 302 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 EPB41L1Q9H4G0 881 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 CIDEBQ9UHD4 219 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 POLIQ9UNA4 740 aa12.45□□□□□ -0.42
LTBR-203ENST00000441074 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.45□□□□□ -0.42
LTBR-203ENST00000441074 NFASCO94856 1347 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 BUD23O43709 281 aaKnown RBP12.44□□□□□ -0.42
LTBR-203ENST00000441074 FKBP6O75344 327 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 SPATA31D3P0C874 917 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 SP4Q02446 784 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 PDIA2Q13087 525 aaKnown RBP12.44□□□□□ -0.42
LTBR-203ENST00000441074 GRM2Q14416 872 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 PGM5Q15124 567 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
LTBR-203ENST00000441074 ADGRD1Q6QNK2 874 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 CAPN12Q6ZSI9 719 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 SPATA31D4Q6ZUB0 917 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 RFX8Q6ZV50 586 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 TTC7BQ86TV6 843 aa12.44□□□□□ -0.42
LTBR-203ENST00000441074 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms