RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 TSPAN1O60635 241 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 F2P00734 622 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 NUDT17P0C025 328 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 MYZAPP0CAP1 466 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 STAG3L1P0CL83 205 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 RARBP10826 455 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PYGMP11217 842 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 AXLP30530 894 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 IRS1P35568 1242 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ACTN2P35609 894 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 HSD17B3P37058 310 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 COILP38432 576 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 CCL23P55773 120 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 SKOR1P84550 965 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 INCA1Q0VD86 236 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 MAMLD1Q13495 774 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ACVR2BQ13705 512 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PTK6Q13882 451 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 AGBL2Q5U5Z8 902 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 EEF1DP3Q658K8 133 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 KDM7AQ6ZMT4 941 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 CCDC105Q8IYK2 499 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 THNSL1Q8IYQ7 743 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 IPO4Q8TEX9 1081 aaKnown RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 CPA5Q8WXQ8 436 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 DDX27Q96GQ7 796 aaKnown RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ATP6V1G3Q96LB4 118 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PRRX2Q99811 253 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 TRIM51Q9BSJ1 452 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 FRMD8P1Q9BZ68 369 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 FOXP3Q9BZS1 431 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 STMN4Q9H169 189 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PLEKHA5Q9HAU0 1116 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ERVK-5Q9HDB9 667 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 TLR9Q9NR96 1032 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 CALCOCO1Q9P1Z2 691 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 WHRNQ9P202 907 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 ZHX1Q9UKY1 873 aaPredicted RBP9.65□□□□□ -0.86
HDAC6-209ENST00000440653 KIAA1257Q9ULG3 409 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 PLAAQ9Y263 795 aa9.65□□□□□ -0.86
HDAC6-209ENST00000440653 A0A087WZ62 844 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 SMIM35A0A1B0GVV1 85 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 H3BQ06 376 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 XPOTO43592 962 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 ADAMTS4O75173 837 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 SNAI1O95863 264 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 RPLP2P05387 115 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 NFICP08651 508 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 WEE2P0C1S8 567 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 FAM153BP0C7A2 387 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 DESP17661 470 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 ARF4P18085 180 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 CD58P19256 250 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 RDXP35241 583 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 PTGIRP43119 386 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 CPT1AP50416 773 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 VCPP55072 806 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 SNX16P57768 344 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 IGBP1P78318 339 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 MRPS25P82663 173 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 PTPN11Q06124 597 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 MYO1EQ12965 1108 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 ACAP1Q15027 740 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 PPP1R7Q15435 360 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 SIX1Q15475 284 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 FAM153CQ494X1 144 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 EMC10Q5UCC4 262 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 DENND2CQ68D51 928 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 NOTUMQ6P988 496 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 DCUN1D2Q6PH85 259 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 SCARA5Q6ZMJ2 495 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 BMP8AQ7Z5Y6 402 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 PASD1Q8IV76 773 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 CCDC50Q8IVM0 306 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 C1orf127Q8N9H9 656 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 GDPD5Q8WTR4 605 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 C18orf8Q96DM3 657 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 FDXACB1Q9BRP7 624 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 CELF4Q9BZC1 486 aaKnown RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 GCOM2Q9BZD3 368 aaPredicted RBP9.64□□□□□ -0.87
HDAC6-209ENST00000440653 DPH5Q9H2P9 285 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 RNPEPQ9H4A4 650 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 MINDY3Q9H8M7 445 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 ZDHHC18Q9NUE0 388 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 FAM153AQ9UHL3 310 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 Q9Y3F1 56 aa9.64□□□□□ -0.87
HDAC6-209ENST00000440653 WDR87Q6ZQQ6 2873 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 A0A1B0GUA9 196 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 TCRBV5S1A1TA0A578 114 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
HDAC6-209ENST00000440653 MYADML2A6NDP7 307 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 TMEM191CA6NGB0 347 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 TMEM221A6NGB7 291 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 A6NJR5 290 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 PROB1E7EW31 1015 aa9.63□□□□□ -0.87
HDAC6-209ENST00000440653 M0R296 226 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms