RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 GGCXP38435 758 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 EFNA5P52803 228 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 FAM189BP81408 668 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ORC1Q13415 861 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CBX2Q14781 532 aaPredicted RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 JADE1Q6IE81 842 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLC39A4Q6P5W5 647 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MPZL3Q6UWV2 235 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CEP128Q6ZU80 1094 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SYDE1Q6ZW31 735 aaPredicted RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 B4GALNT4Q76KP1 1039 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SND1Q7KZF4 910 aaKnown RBP eCLIP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 PEX26Q7Z412 305 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 YTHDF3Q7Z739 585 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 NT5DC3Q86UY8 548 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TAX1BP1Q86VP1 789 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ZNF677Q86XU0 584 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 VN1R2Q8NFZ6 395 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLC22A17Q8WUG5 538 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ING5Q8WYH8 240 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLCO2A1Q92959 643 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CLP1Q92989 425 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TRIM11Q96F44 468 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 PLVAPQ9BX97 442 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 INTS2Q9H0H0 1204 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SMOC2Q9H3U7 446 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 RPF1Q9H9Y2 349 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 PIDD1Q9HB75 910 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MRPL17Q9NRX2 175 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TOPORSQ9NS56 1045 aaPredicted RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ADAMTS1Q9UHI8 967 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 AGO2Q9UKV8 859 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 DDX3XO00571 662 aaKnown RBP eCLIP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 PODXLO00592 558 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SCAMP3O14828 347 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TEX28O15482 410 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 HOXA2O43364 376 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 RTN2O75298 545 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TOM1L1O75674 476 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CPP00450 1065 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 RPLP2P05387 115 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MYBL1P10243 752 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 GJA1P17302 382 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TNNI1P19237 187 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLC9A1P19634 815 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ACAT1P24752 427 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CTNNA2P26232 953 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ADSSP30520 456 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 OR1D2P34982 312 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 LTBRP36941 435 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 RAB27AP51159 221 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 NAP1L1P55209 391 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 NTHL1P78549 312 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MRPS5P82675 430 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 LMNB2Q03252 620 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLC10A6Q3KNW5 377 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 FUT10Q6P4F1 479 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SCARA5Q6ZMJ2 495 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CBWD2Q8IUF1 395 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 OLIG1Q8TAK6 271 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 LMO3Q8TAP4 145 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 P3H4Q92791 437 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 FBXL18Q96ME1 805 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM109Q9BVC6 243 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 MRPL9Q9BYD2 267 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CCDC113Q9H0I3 377 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 UVRAGQ9P2Y5 699 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 DMGDHQ9UI17 866 aaKnown RBP5.04□□□□□ -1.6
EDEM3-203ENST00000439962 RASAL2Q9UJF2 1139 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 ADAM28Q9UKQ2 775 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SLC27A5Q9Y2P5 690 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 CDY1Q9Y6F8 540 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 SQORQ9Y6N5 450 aa5.04□□□□□ -1.6
EDEM3-203ENST00000439962 PIEZO1Q92508 2521 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 TMEM265A0A087WTH1 108 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GOLGA6L10A6NI86 522 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 EIF3HO15372 352 aaKnown RBP eCLIP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CCL16O15467 120 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GLP2RO95838 553 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 PAEPP09466 180 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CPB1P15086 417 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GARTP22102 1010 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CHRNA3P32297 505 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 PTP4A2Q12974 167 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 ENOX2Q16206 610 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CYP1B1Q16678 543 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 DNAJC21Q5F1R6 531 aaKnown RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 SDHAF4Q5VUM1 108 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 CDCA2Q69YH5 1023 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 MICALCLQ6ZW33 695 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 SRLQ86TD4 932 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 COLGALT2Q8IYK4 626 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 SLC39A11Q8N1S5 342 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 UBL4BQ8N7F7 174 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 C12orf50Q8NA57 414 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 XXYLT1Q8NBI6 393 aa5.03□□□□□ -1.6
EDEM3-203ENST00000439962 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.03□□□□□ -1.6
EDEM3-203ENST00000439962 SP7Q8TDD2 431 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms