RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 WEE1P30291 646 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 NDST1P52848 882 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 STX17P56962 302 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 GPC5P78333 572 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 SIX5Q8N196 739 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 CRYBG2Q8N1P7 616 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 TTC39CQ8N584 583 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 MLKLQ8NB16 471 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 DEPDC1BQ8WUY9 529 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 MRPS31Q92665 395 aaKnown RBP17.3■□□□□ 0.36
SMPD4-207ENST00000435455 SEMA4DQ92854 862 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 C8orf48Q96LL4 319 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 MYRFLQ96LU7 910 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 B3GNT5Q9BYG0 378 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 NUP62CLQ9H1M0 184 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 EHD2Q9NZN4 543 aa17.3■□□□□ 0.36
SMPD4-207ENST00000435455 MUC6Q6W4X9 2439 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 SOBPA7XYQ1 873 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 F8VP50 259 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 PDGFBP01127 241 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-207ENST00000435455 CYP4F8P98187 520 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 CBWD6Q4V339 395 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 CBWD3Q5JTY5 395 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 CBWD5Q5RIA9 395 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 STXBP5Q5T5C0 1151 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 ACOT1Q86TX2 421 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 ARID3BQ8IVW6 561 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-207ENST00000435455 MFSD6LQ8IWD5 586 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 STKLD1Q8NE28 680 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 MED10Q9BTT4 135 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 NT5C1AQ9BXI3 368 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 PLA2G2FQ9BZM2 168 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 ZNF518BQ9C0D4 1074 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 FAM124BQ9H5Z6 455 aaPredicted RBP17.29■□□□□ 0.36
SMPD4-207ENST00000435455 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 CA14Q9ULX7 337 aa17.29■□□□□ 0.36
SMPD4-207ENST00000435455 ANAPC1Q9H1A4 1944 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 CLDN5O00501 218 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 DPYSL4O14531 572 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 PMM2O15305 246 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 PSMC3P17980 439 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 RFX1P22670 979 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 VIPR2P41587 438 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 VITQ6UXI7 678 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 DENND5BQ6ZUT9 1274 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 TMEM150AQ86TG1 271 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 FAM35AQ86V20 835 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 SHDQ96IW2 340 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 TRMT61BQ9BVS5 477 aaKnown RBP17.28■□□□□ 0.36
SMPD4-207ENST00000435455 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
SMPD4-207ENST00000435455 ARHGEF3Q9NR81 526 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 HMGXB4Q9UGU5 601 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 KMT2EQ8IZD2 1858 aa17.28■□□□□ 0.36
SMPD4-207ENST00000435455 KRBA1A5PL33 1030 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 HEPACAM2A8MVW5 462 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 LRRN2O75325 713 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CILPO75339 1184 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CCDC192P0DO97 292 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CD58P19256 250 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 FMO5P49326 533 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CLCN5P51795 746 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 MARSP56192 900 aaKnown RBP17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CETN1Q12798 172 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 ASTLQ6HA08 431 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-207ENST00000435455 MON1AQ86VX9 555 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 TRIM59Q8IWR1 403 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 YAF2Q8IY57 180 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 CMTM8Q8IZV2 173 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 FLCNQ8NFG4 579 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 IRF7Q92985 503 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 SMARCD1Q96GM5 515 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 TTLL2Q9BWV7 592 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 SLC46A2Q9BY10 475 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 KCNH6Q9H252 994 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 BRD9Q9H8M2 597 aa17.27■□□□□ 0.36
SMPD4-207ENST00000435455 DMAP1Q9NPF5 467 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-207ENST00000435455 ARIH1Q9Y4X5 557 aaPredicted RBP17.27■□□□□ 0.36
SMPD4-207ENST00000435455 STK25O00506 426 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 P4HA2O15460 535 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 AP1G2O75843 785 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 AVPR2P30518 371 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 AVPR1AP37288 418 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 CACNA2D1P54289 1103 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
SMPD4-207ENST00000435455 ORC1Q13415 861 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 GRM2Q14416 872 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 PHLDB3Q6NSJ2 640 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 PAQR9Q6ZVX9 377 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 FUKQ8N0W3 1084 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 TATDN2Q93075 761 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 TMEM30AQ9NV96 361 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 TRPM5Q9NZQ8 1165 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 DACH1Q9UI36 760 aa17.26■□□□□ 0.35
SMPD4-207ENST00000435455 ZNF263O14978 683 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 TADA3O75528 432 aa17.25■□□□□ 0.35
SMPD4-207ENST00000435455 RTN3O95197 1032 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-207ENST00000435455 PRAMEF12O95522 483 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms