RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 ATP5JP18859 108 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 BTF3P20290 206 aaKnown RBP8.26□□□□□ -1.09
PTPRK-212ENST00000434424 TSPAN7P41732 249 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 MRE11P49959 708 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 PSMC1P62191 440 aaKnown RBP8.26□□□□□ -1.09
PTPRK-212ENST00000434424 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
PTPRK-212ENST00000434424 APBA1Q02410 837 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 TLE2Q04725 743 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 SLC29A2Q14542 456 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 AMOTQ4VCS5 1084 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 KRT40Q6A162 431 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 HEATR4Q86WZ0 1026 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 NLGN4YQ8NFZ3 816 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-212ENST00000434424 RILPL2Q969X0 211 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 ERP27Q96DN0 273 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 MS4A7Q9GZW8 240 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-212ENST00000434424 ZCCHC4Q9H5U6 513 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 TBC1D22BQ9NU19 505 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 JKAMPQ9P055 326 aa8.26□□□□□ -1.09
PTPRK-212ENST00000434424 A0A087WZ62 844 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 HMX3A6NHT5 357 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 FCHO1O14526 889 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 KCNQ3O43525 872 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 FAM155BO75949 473 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 JUNP05412 331 aaKnown RBP8.25□□□□□ -1.09
PTPRK-212ENST00000434424 VSIG10L2P0DP72 767 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 CST5P28325 142 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-212ENST00000434424 ADD2P35612 726 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 CASRP41180 1078 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 LIFRP42702 1097 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 NCKAP1LP55160 1127 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 MLLT6P55198 1093 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-212ENST00000434424 TRPC3Q13507 836 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 MAPKAPK3Q16644 382 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 TMEM132EQ6IEE7 984 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 ZNF365Q70YC5 407 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 LARP4Q71RC2 724 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRK-212ENST00000434424 LDHDQ86WU2 507 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 KRT73Q86Y46 540 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 CPOQ8IVL8 374 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 FAM9BQ8IZU0 186 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 OR5M3Q8NGP4 307 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 HERVK_113Q902F9 699 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 CFHR4Q92496 578 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 MLXIPQ9HAP2 919 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 GPR35Q9HC97 309 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 IRAK4Q9NWZ3 460 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 SIRT5Q9NXA8 310 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 SLC23A1Q9UHI7 598 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 FEM1BQ9UK73 627 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 SLC45A1Q9Y2W3 748 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 AFF2P51816 1311 aa8.25□□□□□ -1.09
PTPRK-212ENST00000434424 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
PTPRK-212ENST00000434424 SLIT1O75093 1534 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 KANK1Q14678 1352 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ZNF785A8K8V0 405 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 RAB27BO00194 218 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 FOXD2O60548 495 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ANXA1P04083 346 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 NPPBP16860 134 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 EGR1P18146 543 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ACVR2AP27037 513 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 TUBP50607 506 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 SETQ01105 290 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 MFSD14BQ5SR56 506 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 DSTYKQ6XUX3 929 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 KIAA0408Q6ZU52 694 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 USP37Q86T82 979 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 HERC6Q8IVU3 1022 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 LINC00482Q8N8I6 264 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 AFG1LQ8WV93 481 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ZCCHC14Q8WYQ9 949 aaKnown RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 CEP95Q96GE4 821 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 NDC1Q9BTX1 674 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 PCDHAC1Q9H158 963 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 JMJD4Q9H9V9 463 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 SEPSECSQ9HD40 501 aaKnown RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 XPR1Q9UBH6 696 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ZMYND8Q9ULU4 1186 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 JAG2Q9Y219 1238 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 MTO1Q9Y2Z2 717 aaKnown RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ARHGAP23Q9P227 1491 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 ABCC3O15438 1527 aa8.24□□□□□ -1.09
PTPRK-212ENST00000434424 PRDM15P57071 1507 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-212ENST00000434424 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 K7ENM7 598 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 ATP1A3P13637 1013 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 IL13P35225 146 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 BPIFB4P59827 614 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 PRKG2Q13237 762 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 ZNF385BQ569K4 471 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.23□□□□□ -1.09
PTPRK-212ENST00000434424 TCERG1LQ5VWI1 586 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 ZNF529Q6P280 563 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 CRTC1Q6UUV9 634 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 THAP4Q8WY91 577 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 LRRC59Q96AG4 307 aaKnown RBP8.23□□□□□ -1.09
PTPRK-212ENST00000434424 NOX5Q96PH1 765 aa8.23□□□□□ -1.09
PTPRK-212ENST00000434424 PPP1R9BQ96SB3 815 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms