RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PDP2Q9P2J9 529 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZMYND8Q9ULU4 1186 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 SSX2IPQ9Y2D8 614 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 USP15Q9Y4E8 981 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 RAD54BQ9Y620 910 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 AATKQ6ZMQ8 1374 aa3.73□□□□□ -1.81
HMGB1P27-201ENST00000431429 ADM5C9JUS6 153 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 RAB27BO00194 218 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRIM38O00635 465 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 PIP5K1BO14986 540 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 NCAM2O15394 837 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 CYP27B1O15528 508 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ASNA1O43681 348 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 CBFA2T3O75081 653 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF623O75123 536 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TNFRSF6BO95407 300 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPATA31D3P0C874 917 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZSCAN22P10073 491 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 PECAM1P16284 738 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TPH1P17752 444 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 CHRM3P20309 590 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ACO1P21399 889 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ATICP31939 592 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 RNASE9P60153 205 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 HSD11B2P80365 405 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 NSUN2Q08J23 767 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 BIRC3Q13489 604 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ATP1A4Q13733 1029 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TOB2Q14106 344 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ICAM4Q14773 271 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 R3HDM1Q15032 1099 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 CYP2A13Q16696 494 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 MGAT5BQ3V5L5 792 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 FBXO38Q6PIJ6 1188 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPATA31D4Q6ZUB0 917 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 GDF7Q7Z4P5 450 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 MAPKAPK5Q8IW41 473 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ADGRG5Q8IZF4 528 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TMEM132CQ8N3T6 1108 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 FAM89AQ96GI7 184 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 BOD1Q96IK1 185 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 TBATAQ96M53 351 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 WDR24Q96S15 920 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 GPR87Q9BY21 358 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 C9orf78Q9NZ63 289 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 SRP68Q9UHB9 627 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 HDAC9Q9UKV0 1011 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 NDRG4Q9ULP0 352 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 LZTS1Q9Y250 596 aa3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 LRRFIP2Q9Y608 721 aaKnown RBP3.72□□□□□ -1.81
HMGB1P27-201ENST00000431429 GAGE12BA1L429 117 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 GAGE12HA6NDE8 117 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 MYADML2A6NDP7 307 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZAR1LA6NP61 321 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ERN1O75460 977 aaKnown RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 RPS6KA4O75676 772 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 GPANK1O95872 356 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 IDEP14735 1019 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 BMP7P18075 431 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 CST5P28325 142 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 HTR7P34969 479 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PXNP49023 591 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PPM1FP49593 454 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 CXADRP78310 365 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM189BP81408 668 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 SCAPQ12770 1279 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRKG1Q13976 671 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 RRP1BQ14684 758 aaKnown RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 KCNAB1Q14722 419 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 BEAN1Q3B7T3 259 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PTCHD3Q3KNS1 767 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAXCQ5TGI0 409 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 SP5Q6BEB4 398 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ABLIM2Q6H8Q1 611 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 GGT6Q6P531 493 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 MZT2AQ6P582 158 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 TMEM108Q6UXF1 575 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 SLC30A10Q6XR72 485 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 MICALCLQ6ZW33 695 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 CLNKQ7Z7G1 428 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 HERC6Q8IVU3 1022 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 GSPT2Q8IYD1 628 aaKnown RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 FAM9AQ8IZU1 332 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 CCDC150Q8NCX0 1101 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZNF668Q96K58 619 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PHACTR3Q96KR7 559 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 UBXN10Q96LJ8 280 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ADAM2Q99965 735 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PABPC3Q9H361 631 aaKnown RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ZNF703Q9H7S9 590 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PARD6AQ9NPB6 346 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 PRDM8Q9NQV8 689 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 LRFN1Q9P244 771 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 LPAR3Q9UBY5 353 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 ANAPC4Q9UJX5 808 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 MTO1Q9Y2Z2 717 aaKnown RBP3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 HS3ST4Q9Y661 456 aa3.71□□□□□ -1.82
HMGB1P27-201ENST00000431429 FPGT-TNNI3KV9GXZ4 949 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms